RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 MYOZ3Q8TDC0 251 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 TM2D1Q9BX74 207 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 SMOC1Q9H4F8 434 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 THYN1Q9P016 225 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 FOXD3Q9UJU5 478 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 LRRC75BQ2VPJ9 315 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 TPRX1Q8N7U7 411 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 OR8B2Q96RD0 313 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 IMMP2LQ96T52 175 aa13.56□□□□□ -0.24
RBFOX1-212ENST00000550418 GCSHP23434 173 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 UCP1P25874 307 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 SSPNQ14714 243 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 SPINK14Q6IE38 97 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 MUC15Q8N387 334 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 OR2H2O95918 312 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 HERVK_113P61574 105 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 NIT1Q86X76 327 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 MRPL37Q9BZE1 423 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 LAMTOR2Q9Y2Q5 125 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 H3BVH4 76 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 LINC00869P0C866 280 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 DEFB109BQ30KR1 87 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 PYY3Q5JQD4 70 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 A0A1W2PQF6 199 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 F5H697 171 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 GFRA3O60609 400 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 S1PR2O95136 353 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 MT-CO3P00414 261 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 MPZP25189 248 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 CD40P25942 277 aa13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 RPL31P62899 125 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-212ENST00000550418 LOC390937A0A1W2PQ73 354 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 K7N7A8 449 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 NDUFA2O43678 99 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 NUBP1P53384 320 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 GFI1BQ5VTD9 330 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 ST6GALNAC3Q8NDV1 305 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 RASL11BQ9BPW5 248 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 ALKBH7Q9BT30 221 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 KLF7O75840 302 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 NPBWR2P48146 333 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 CEBPDP49716 269 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 PRNTQ86SH4 94 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 OR1L1Q8NH94 360 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 TMEM70Q9BUB7 260 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 SNRNP200O75643 2136 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 PRR32B1ATL7 298 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 CLDN18P56856 261 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 IGLV3-21P80748 117 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 KIF26BQ2KJY2 2108 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 GPX4P36969 197 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 SELENOTP62341 195 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 RPL30P62888 115 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 GUCD1Q96NT3 240 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 AICDAQ9GZX7 198 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 TMEM106BQ9NUM4 274 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 IL36BQ9NZH7 164 aa13.54□□□□□ -0.24
RBFOX1-212ENST00000550418 MARCH11A6NNE9 402 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 HYPMO75409 117 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 ASCL3Q9NQ33 180 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 CYTL1Q9NRR1 136 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 ABCA7Q8IZY2 2146 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 P2RY6Q15077 328 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 SAXO1Q8IYX7 474 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 FAM222BQ8WU58 562 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 TRBV6-7A0A0A0MS04 114 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 C17orf51A8MQB3 221 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 NUDT3O95989 172 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 C8orf88P0DMB2 117 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 GCHFRP30047 84 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 CENPWQ5EE01 88 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 FBLN5Q9UBX5 448 aa13.53□□□□□ -0.24
RBFOX1-212ENST00000550418 A0A1W2PPE3 182 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 PGPA6NDG6 321 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 EPHA8P29322 1005 aaPredicted RBP13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 PRRX1P54821 245 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 CCL20P78556 96 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 KCNMB1Q16558 191 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 MOGAT3Q86VF5 341 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 AMMECR1Q9Y4X0 333 aaPredicted RBP13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 GNG7O60262 68 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 CCL17Q92583 94 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 AP5S1Q9NUS5 200 aa13.52□□□□□ -0.24
RBFOX1-212ENST00000550418 CEACAM18A8MTB9 384 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 SLC17A3O00476 420 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 TMPRSS2O15393 492 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 CTSBP07858 339 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 CXCL1P09341 107 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 PMCHL2Q9BQD1 86 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 PRDM6Q9NQX0 595 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 NUTF2P61970 127 aaKnown RBP13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 MDP1Q86V88 176 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 PGLYRP4Q96LB8 373 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 PRDM13Q9H4Q3 707 aa13.52□□□□□ -0.25
RBFOX1-212ENST00000550418 ANK1P16157 1881 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms