RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 IGSF10Q6WRI0 2623 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 NKX6-3A6NJ46 265 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 MMP9P14780 707 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 DLX1P56177 255 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 ZNF266Q14584 549 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 TMEM200BQ69YZ2 307 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 QTRT1Q9BXR0 403 aaKnown RBP17.24■□□□□ 0.35
PRDM4-205ENST00000550376 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.24■□□□□ 0.35
PRDM4-205ENST00000550376 IDI2-AS1Q9NZ38 188 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 FBXO7Q9Y3I1 522 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 IGHV1-69-2A0A0G2JMI3 117 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 TMEM218A2RU14 115 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 RAB19A4D1S5 217 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 UQCRFS1P47985 274 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 THNSL2Q86YJ6 484 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 C1orf87Q8N0U7 546 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 RSG1Q9BU20 258 aa17.23■□□□□ 0.35
PRDM4-205ENST00000550376 DVL1O14640 695 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 BLOC1S1P78537 153 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 MRPS11P82912 194 aaKnown RBP17.22■□□□□ 0.35
PRDM4-205ENST00000550376 BAXQ07812 192 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 MSMO1Q15800 293 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 SLC25A24Q6NUK1 477 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 SSX8Q7RTT4 187 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 ATP5SQ99766 215 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 ZNF251Q9BRH9 671 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 PARP11Q9NR21 331 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 HSPB7Q9UBY9 170 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 MALRD1Q5VYJ5 2156 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 GPR37O15354 613 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 EIF3GO75821 320 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRDM4-205ENST00000550376 FBXL19-AS1Q494R0 122 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 S1PR3Q99500 378 aa17.22■□□□□ 0.35
PRDM4-205ENST00000550376 ZFYVE26Q68DK2 2539 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 hADV38S2A0JD32 116 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 B9A039 149 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 GUCA2BQ16661 112 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 LRRC46Q96FV0 321 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 OR4C12Q96R67 309 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 PIGBOS1A0A0B4J2F0 54 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 ZNF439Q8NDP4 499 aa17.21■□□□□ 0.35
PRDM4-205ENST00000550376 FLNCQ14315 2725 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 ZNF729A6NN14 1252 aaPredicted RBP17.2■□□□□ 0.34
PRDM4-205ENST00000550376 TSPAN15O95858 294 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 F2RL1P55085 397 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 CCL20P78556 96 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 ZNF383Q8NA42 475 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 COA4Q9NYJ1 87 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 RPUSD1Q9UJJ7 312 aaKnown RBP17.2■□□□□ 0.34
PRDM4-205ENST00000550376 CEBPZOSA8MTT3 80 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 RAB29O14966 203 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 REG1BP48304 166 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 UQCC1Q9NVA1 299 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 PRELID1Q9Y255 219 aa17.2■□□□□ 0.34
PRDM4-205ENST00000550376 MED13LQ71F56 2210 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 MAP1AP78559 2803 aaPredicted RBP17.19■□□□□ 0.34
PRDM4-205ENST00000550376 CSMD1Q96PZ7 3565 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 TNFRSF13BO14836 293 aaPredicted RBP17.19■□□□□ 0.34
PRDM4-205ENST00000550376 NDUFB3O43676 98 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 IFNA17P01571 189 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 MYOD1P15172 320 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 M6PRP20645 277 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 AVPI1Q5T686 147 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 LILRB2Q8N423 598 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 DTD1Q8TEA8 209 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 NUP50Q9UKX7 468 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 LINC00312Q9Y6C7 94 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 F8W036 122 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 RNASEK-C17orf49H0YIS7 233 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 HPRT1P00492 218 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 EFNB3Q15768 340 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 ZNF672Q499Z4 452 aaPredicted RBP17.19■□□□□ 0.34
PRDM4-205ENST00000550376 IL34Q6ZMJ4 242 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 ZNF525Q8N782 197 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 CORO2AQ92828 525 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 NCOR1P1Q9H4R4 102 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 TNCP24821 2201 aa17.19■□□□□ 0.34
PRDM4-205ENST00000550376 HFEQ30201 348 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 DDB2Q92466 427 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 VSIRQ9H7M9 311 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 PRELID3BQ9Y3B1 194 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 RAB7AP51149 207 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 TFF3Q07654 80 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 DIAPH2-AS1Q14236 149 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 UQCC3Q6UW78 93 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 ZNF714Q96N38 554 aa17.18■□□□□ 0.34
PRDM4-205ENST00000550376 IGKV1-16P04430 117 aa17.17■□□□□ 0.34
PRDM4-205ENST00000550376 LRRC10Q5BKY1 277 aa17.17■□□□□ 0.34
PRDM4-205ENST00000550376 CD300LFQ8TDQ1 290 aa17.17■□□□□ 0.34
PRDM4-205ENST00000550376 ATG12O94817 140 aa17.17■□□□□ 0.34
PRDM4-205ENST00000550376 IFNA5P01569 189 aa17.17■□□□□ 0.34
PRDM4-205ENST00000550376 LOXP28300 417 aaPredicted RBP17.17■□□□□ 0.34
PRDM4-205ENST00000550376 TMEM140Q9NV12 185 aa17.17■□□□□ 0.34
PRDM4-205ENST00000550376 UBE2L5PA0A1B0GUS4 154 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 LYPD6BQ8NI32 183 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 TSNAXQ99598 290 aaKnown RBP17.16■□□□□ 0.34
PRDM4-205ENST00000550376 CACNA1BQ00975 2339 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 FAM90A26D6RGX4 464 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 OPN1MWP04001 364 aa17.16■□□□□ 0.34
PRDM4-205ENST00000550376 CT45A6P0DMU7 189 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms