RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 CEACAM19Q7Z692 300 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 BPIFB6Q8NFQ5 453 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 USMG5Q96IX5 58 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 TMEM68Q96MH6 324 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 NEURL2Q9BR09 285 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 CABLES2Q9BTV7 478 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 OR2D2Q9H210 308 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 SELENOKQ9Y6D0 94 aa8.71□□□□□ -1.02
SMARCD1-208ENST00000550280 LINC00473A8K010 186 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 SLC17A2O00624 439 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 CDK1P06493 297 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 OR9G9P0C7N8 305 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 GSTT2P0CG29 244 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 GSTT2BP0CG30 244 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 RHOGP84095 191 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 PRSS8Q16651 343 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 DEFB114Q30KQ6 69 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 MS4A15Q8N5U1 240 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 OR2K2Q8NGT1 345 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 SRSF12Q8WXF0 261 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 CMSS1Q9BQ75 279 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 ZC4H2Q9NQZ6 224 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 MGAT4AQ9UM21 535 aa8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 AK6Q9Y3D8 172 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-208ENST00000550280 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 TRBV6-7A0A0A0MS04 114 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 BET1O15155 118 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 FABP7O15540 132 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 HLA-AP01891 365 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 FCGR3AP08637 254 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 RPS25P62851 125 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 EWSR1Q01844 656 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 EXOSC2Q13868 293 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 IRF3Q14653 427 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 RNLSQ5VYX0 342 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 C10orf67Q8IYJ2 551 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 C8orf59Q8N0T1 100 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 PACRGLQ8N7B6 248 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 OR4A4PQ8NGN8 299 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 LINC00476Q8WZB0 136 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 SNAPC3Q92966 411 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 TMEM203Q969S6 136 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 WDR89Q96FK6 387 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 URM1Q9BTM9 101 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 VPS13DQ5THJ4 4388 aa8.69□□□□□ -1.02
SMARCD1-208ENST00000550280 A0A1B0GW64 132 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 C2orf70A6NJV1 201 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 PPP5D1E7EU14 171 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 SHOXO15266 292 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 TPPPO94811 219 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 DUTP33316 252 aaKnown RBP8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 UBE2KP61086 200 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 SPHARQ15513 63 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 TNXAQ16473 311 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 LIPKQ5VXJ0 399 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 LAX1Q8IWV1 398 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 TEX45Q8NA69 505 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 CACNG8Q8WXS5 425 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
SMARCD1-208ENST00000550280 TMEM272A0A1B0GTI8 110 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 TEX22C9J3V5 150 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 E7EUB6 86 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 AIREO43918 545 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 CRYZL1O95825 349 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 SAA1P0DJI8 122 aaPredicted RBP8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 FOLR2P14207 255 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 KIR2DS2P43631 304 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 SERPINB10P48595 397 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 TAGLNQ01995 201 aaKnown RBP8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 TATDN3Q17R31 274 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 C2orf76Q3KRA6 126 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 FAM3DQ96BQ1 224 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 CCDC140Q96MF4 163 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 PHB2Q99623 299 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 OVOL2Q9BRP0 275 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 MND1Q9BWT6 205 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 PLGRKTQ9HBL7 147 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 PEMTQ9UBM1 199 aa8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 ELF5Q9UKW6 265 aaPredicted RBP8.67□□□□□ -1.02
SMARCD1-208ENST00000550280 HMX3A6NHT5 357 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 FAM223BA6NKX1 122 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 RAB27BO00194 218 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 MFNGO00587 321 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 OR2J3O76001 311 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 OR2C1O95371 312 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 BRWD1-AS2P59051 145 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 RPL30P62888 115 aaKnown RBP8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 ATP5G2Q06055 141 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 TPBGQ13641 420 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 RAB11BQ15907 218 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 OGFRL1Q5TC84 451 aaPredicted RBP8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 FAM223AQ8IWN6 122 aa8.66□□□□□ -1.02
SMARCD1-208ENST00000550280 H1FOOQ8IZA3 346 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms