RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 OSR1Q8TAX0 266 aaPredicted RBP20.4■□□□□ 0.86
CPSF6-205ENST00000550075 TCTEX1D2Q8WW35 142 aa20.4■□□□□ 0.86
CPSF6-205ENST00000550075 PMP2P02689 132 aa20.39■□□□□ 0.85
CPSF6-205ENST00000550075 ELANEP08246 267 aa20.39■□□□□ 0.85
CPSF6-205ENST00000550075 CX3CL1P78423 397 aa20.39■□□□□ 0.85
CPSF6-205ENST00000550075 VMA21Q3ZAQ7 101 aa20.39■□□□□ 0.85
CPSF6-205ENST00000550075 TMEM17Q86X19 198 aa20.39■□□□□ 0.85
CPSF6-205ENST00000550075 LAX1Q8IWV1 398 aa20.39■□□□□ 0.85
CPSF6-205ENST00000550075 TRAV41A0A0B4J266 112 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 FCGR3BO75015 233 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 CA2P00918 260 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 IGLV2-14P01704 120 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 IGHG4P01861 327 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 HLA-DMAP28067 261 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 SLC6A1P30531 599 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 HRH1P35367 487 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 KIR2DS2P43631 304 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 RFX2P48378 723 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 RPL23AP62750 156 aaKnown RBP20.38■□□□□ 0.85
CPSF6-205ENST00000550075 CFHR3Q02985 330 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 ACTBL2Q562R1 376 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 PPP1R27Q86WC6 154 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 OR4S2Q8NH73 311 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 CLCC1Q96S66 551 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 DCUN1D5Q9BTE7 237 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 MIXL1Q9H2W2 232 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 CCL28Q9NRJ3 127 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 TAS2R8Q9NYW2 309 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 RABL2AQ9UBK7 228 aaPredicted RBP20.38■□□□□ 0.85
CPSF6-205ENST00000550075 RABL2BQ9UNT1 228 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 CEPT1Q9Y6K0 416 aa20.38■□□□□ 0.85
CPSF6-205ENST00000550075 NUDT19A8MXV4 375 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 IGLV2-23P01705 113 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 MRPS10P82664 201 aaKnown RBP20.37■□□□□ 0.85
CPSF6-205ENST00000550075 NDPQ00604 133 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 TMEM267Q0VDI3 215 aaPredicted RBP20.37■□□□□ 0.85
CPSF6-205ENST00000550075 CATR1Q13166 79 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 DHRS11Q6UWP2 260 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 ZNF562Q6V9R5 426 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 TCTEX1D1Q8N7M0 179 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 OR6F1Q8NGZ6 308 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 ZNF2Q9BSG1 426 aaPredicted RBP20.37■□□□□ 0.85
CPSF6-205ENST00000550075 C6orf62Q9GZU0 229 aaPredicted RBP20.37■□□□□ 0.85
CPSF6-205ENST00000550075 WSB1Q9Y6I7 421 aa20.37■□□□□ 0.85
CPSF6-205ENST00000550075 CTDSP2O14595 271 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 CREBL2O60519 120 aaPredicted RBP20.36■□□□□ 0.85
CPSF6-205ENST00000550075 PF4P02776 101 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 CRIP2P52943 208 aaPredicted RBP20.36■□□□□ 0.85
CPSF6-205ENST00000550075 ECSCRQ19T08 205 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 OR2B11Q5JQS5 317 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 MFSD4AQ8N468 514 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 ARPC1AQ92747 370 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 MOB3AQ96BX8 217 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 TPSG1Q9NRR2 321 aa20.36■□□□□ 0.85
CPSF6-205ENST00000550075 FCN1O00602 326 aa20.35■□□□□ 0.85
CPSF6-205ENST00000550075 UBE2KP61086 200 aa20.35■□□□□ 0.85
CPSF6-205ENST00000550075 TSPAN5P62079 268 aa20.35■□□□□ 0.85
CPSF6-205ENST00000550075 RPL30P62888 115 aaKnown RBP20.35■□□□□ 0.85
CPSF6-205ENST00000550075 EIF4EBP1Q13541 118 aaPredicted RBP20.35■□□□□ 0.85
CPSF6-205ENST00000550075 RNASE12Q5GAN4 147 aaKnown RBP20.35■□□□□ 0.85
CPSF6-205ENST00000550075 TMEM65Q6PI78 240 aa20.35■□□□□ 0.85
CPSF6-205ENST00000550075 RNF152Q8N8N0 203 aa20.35■□□□□ 0.85
CPSF6-205ENST00000550075 PLXNB1O43157 2135 aa20.35■□□□□ 0.85
CPSF6-205ENST00000550075 TNFSF12O43508 249 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 CNIH1O95406 144 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 LYSMD2Q8IV50 215 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 TEX45Q8NA69 505 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 KLHL30-AS1Q8NEE0 82 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 OR52I2Q8NH67 350 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 FCAMRQ8WWV6 532 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 DIRAS2Q96HU8 199 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 SLIRPQ9GZT3 109 aaKnown RBP20.34■□□□□ 0.85
CPSF6-205ENST00000550075 A3GALT2U3KPV4 340 aa20.34■□□□□ 0.85
CPSF6-205ENST00000550075 CMYA5Q8N3K9 4069 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 G3V318 75 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 TBPP20226 339 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 PPIFP30405 207 aaKnown RBP20.33■□□□□ 0.85
CPSF6-205ENST00000550075 GNB1P62873 340 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 FXYD3Q14802 87 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 ZNF695Q8IW36 515 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 MCFD2Q8NI22 146 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 MTFP1Q9UDX5 166 aa20.33■□□□□ 0.85
CPSF6-205ENST00000550075 RSL24D1Q9UHA3 163 aaKnown RBP20.33■□□□□ 0.85
CPSF6-205ENST00000550075 FOXA2Q9Y261 457 aaPredicted RBP20.33■□□□□ 0.85
CPSF6-205ENST00000550075 GABARAPH6UMI1 98 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 RPLP1P05386 114 aaKnown RBP20.32■□□□□ 0.84
CPSF6-205ENST00000550075 CRYGBP07316 175 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 PSMB8P28062 276 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 RNASE10Q5GAN6 216 aaKnown RBP20.32■□□□□ 0.84
CPSF6-205ENST00000550075 VAX1Q5SQQ9 334 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 PYHIN1Q6K0P9 492 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 ZNF818PQ6ZRF7 136 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 CMTM1Q8IZ96 169 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 POC5Q8NA72 575 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 MINDY2Q8NBR6 621 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 GRPEL2Q8TAA5 225 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 ABHD1Q96SE0 405 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 FBXO7Q9Y3I1 522 aa20.32■□□□□ 0.84
CPSF6-205ENST00000550075 A0A1W2PN81 502 aa20.31■□□□□ 0.84
CPSF6-205ENST00000550075 SRRM4A7MD48 611 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms