RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LIPKQ5VXJ0 399 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 RNLSQ5VYX0 342 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 SNAPC3Q92966 411 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
RAB5C-205ENST00000550013 A0A0B4J203 849 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 PTGES3LE9PB15 166 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 FABP7O15540 132 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 CD7P09564 240 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 OR9G9P0C7N8 305 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 GSTT2P0CG29 244 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 GSTT2BP0CG30 244 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 SERPINB10P48595 397 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 RPS25P62851 125 aaKnown RBP11.65□□□□□ -0.54
RAB5C-205ENST00000550013 RHOGP84095 191 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 EXOSC2Q13868 293 aaKnown RBP11.65□□□□□ -0.54
RAB5C-205ENST00000550013 MED22Q15528 200 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 TNXAQ16473 311 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 CD300EQ496F6 205 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-205ENST00000550013 IDO2Q6ZQW0 420 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 DEFB125Q8N687 156 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 MAFIPQ8WZ33 124 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 NEURL2Q9BR09 285 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 PEMTQ9UBM1 199 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 NKX1-2Q9UD57 310 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-205ENST00000550013 KCNK7Q9Y2U2 307 aa11.65□□□□□ -0.54
RAB5C-205ENST00000550013 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
RAB5C-205ENST00000550013 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
RAB5C-205ENST00000550013 ZNF785A8K8V0 405 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 TPPPO94811 219 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
RAB5C-205ENST00000550013 EDN2P20800 178 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 ZNF45Q02386 682 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 CBX3Q13185 183 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 RCN1Q15293 331 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 PRSS8Q16651 343 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 RTL8BQ17RB0 113 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 OR56B1Q8NGI3 324 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 OR2K2Q8NGT1 345 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
RAB5C-205ENST00000550013 UFD1Q92890 307 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 FAM3DQ96BQ1 224 aa11.64□□□□□ -0.55
RAB5C-205ENST00000550013 ZNF230Q9UIE0 474 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-205ENST00000550013 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 MPPED1O15442 326 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 DENRO43583 198 aaKnown RBP11.63□□□□□ -0.55
RAB5C-205ENST00000550013 CRYZL1O95825 349 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 FCGR3AP08637 254 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 UBE2KP61086 200 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 C2orf76Q3KRA6 126 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 VMA21Q3ZAQ7 101 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 IL17DQ8TAD2 202 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 ACOT12Q8WYK0 555 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 DDB2Q92466 427 aa11.63□□□□□ -0.55
RAB5C-205ENST00000550013 TMEM272A0A1B0GTI8 110 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 LINC00473A8K010 186 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 AIREO43918 545 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 RRASP10301 218 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 MRPS15P82914 257 aaKnown RBP11.62□□□□□ -0.55
RAB5C-205ENST00000550013 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
RAB5C-205ENST00000550013 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 IRF3Q14653 427 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 DEFB114Q30KQ6 69 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 OGFRL1Q5TC84 451 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-205ENST00000550013 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 LAX1Q8IWV1 398 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 DYNLRB2Q8TF09 96 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 SLC2A8Q9NY64 477 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 RBM7Q9Y580 266 aaKnown RBP11.62□□□□□ -0.55
RAB5C-205ENST00000550013 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
RAB5C-205ENST00000550013 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.61□□□□□ -0.55
RAB5C-205ENST00000550013 TRBV9A0A0B4J1U6 114 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 PPP5D1E7EU14 171 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
RAB5C-205ENST00000550013 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 CALRP27797 417 aaKnown RBP11.61□□□□□ -0.55
RAB5C-205ENST00000550013 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
RAB5C-205ENST00000550013 TPBGQ13641 420 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 GUCA2BQ16661 112 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 HES5Q5TA89 166 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 RAB3CQ96E17 227 aa11.61□□□□□ -0.55
RAB5C-205ENST00000550013 ZNF430Q9H8G1 570 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-205ENST00000550013 A0A075B6Q4 140 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 C2orf70A6NJV1 201 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 OR11H12B2RN74 326 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 EBAG9O00559 213 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 TUSC2O75896 110 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 ARL6IP5O75915 188 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 SAA1P0DJI8 122 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-205ENST00000550013 FOLR2P14207 255 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 GNB3P16520 340 aa11.6□□□□□ -0.55
RAB5C-205ENST00000550013 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms