RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 TAS2R45P59539 299 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 DEFA6Q01524 100 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 DHRS2Q13268 280 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 PMAIP1Q13794 54 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 ACOT6Q3I5F7 207 aaPredicted RBP1.55□□□□□ -2.16
CCDC38-208ENST00000549876 MRPL51Q4U2R6 128 aaKnown RBP1.55□□□□□ -2.16
CCDC38-208ENST00000549876 TMEM97Q5BJF2 176 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 PPP1R2P3Q6NXS1 205 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 FAM173BQ6P4H8 233 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 ALKAL1Q6UXT8 129 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 BAP18Q8IXM2 172 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 C1orf174Q8IYL3 243 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 ZNF680Q8NEM1 530 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 PHOSPHO2Q8TCD6 241 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 SLC25A44Q96H78 314 aaPredicted RBP1.55□□□□□ -2.16
CCDC38-208ENST00000549876 CCL13Q99616 98 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 GLTPQ9NZD2 209 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 ZNF443Q9Y2A4 671 aaPredicted RBP1.55□□□□□ -2.16
CCDC38-208ENST00000549876 ARL5AQ9Y689 179 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 V9GYQ6 96 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 DCCP43146 1447 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 SSH2Q76I76 1423 aa1.55□□□□□ -2.16
CCDC38-208ENST00000549876 IGKV2-24A0A0C4DH68 120 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 IGHV1-69-2A0A0G2JMI3 117 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 PQLC2LA1A4F0 135 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 OR6C6A6NF89 314 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 OR4C45A6NMZ5 311 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 EEF1E1-BLOC1S5C9J1V9 151 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 C15orf65H3BRN8 121 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 OR2B3O76000 313 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 IGHMP01871 453 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 HLA-DQB2P05538 268 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 LGALS3P17931 250 aaKnown RBP1.54□□□□□ -2.16
CCDC38-208ENST00000549876 CRABP1P29762 137 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 MAGEA12P43365 314 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 SERPINB9P50453 376 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 FOXA1P55317 472 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 PSME3P61289 254 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 RPS11P62280 158 aaKnown RBP eCLIP1.54□□□□□ -2.16
CCDC38-208ENST00000549876 HIST1H3AP68431 136 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 H3F3AP84243 136 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 LGALSLQ3ZCW2 172 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-208ENST00000549876 ZNF660Q6AZW8 331 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-208ENST00000549876 CCDC121Q6ZUS5 278 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 ZNF664Q8N3J9 261 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 C1orf64Q8NEQ6 169 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 OR51D1Q8NGF3 324 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 OR2T27Q8NH04 317 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 LHFPL5Q8TAF8 219 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 DCUN1D1Q96GG9 259 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 UPK3BQ9BT76 320 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 FBXO5Q9UKT4 447 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 ANAPC10Q9UM13 185 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 KLK5Q9Y337 293 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-208ENST00000549876 PXMP4Q9Y6I8 212 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 ZBED9Q6R2W3 1325 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 EIF3AQ14152 1382 aaKnown RBP1.54□□□□□ -2.16
CCDC38-208ENST00000549876 SPATA31E1Q6ZUB1 1445 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 NUP205Q92621 2012 aa1.54□□□□□ -2.16
CCDC38-208ENST00000549876 A0A087WUJ7 227 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 A0A1B0GU33 70 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 A0A1B0GW54 56 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 DHRS12A0PJE2 317 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 A8MWP6 167 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 GGTLC3B5MD39 225 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 PSMD12O00232 456 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 SLC17A3O00476 420 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 BHLHE40O14503 412 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 SERPINA1P01009 418 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 NPPCP23582 126 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 GZMMP51124 257 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 TSPEAR-AS2P59090 65 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 RAB14P61106 215 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 FKBP1AP62942 108 aaKnown RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 TNFAIP6P98066 277 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 FLI1Q01543 452 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 CAV1Q03135 178 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 FABP9Q0Z7S8 132 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 THADAQ6YHU6 1953 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 SDIM1Q6ZPB5 146 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 SCXQ7RTU7 201 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 C20orf196Q8IYI0 205 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 Q8NAQ8 132 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 NAV1Q8NEY1 1877 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 FNDC9Q8TBE3 224 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 DGCR14Q96DF8 476 aaKnown RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 GNPNAT1Q96EK6 184 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-208ENST00000549876 ATAD5Q96QE3 1844 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 PRRT1Q99946 306 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 TRIM4Q9C037 500 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 ABCG5Q9H222 651 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 DCSTAMPQ9H295 470 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 DUSP21Q9H596 190 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 C11orf1Q9H5F2 150 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 TAAR3PQ9P1P4 343 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 AK3Q9UIJ7 227 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 VPREB3Q9UKI3 123 aa1.53□□□□□ -2.16
CCDC38-208ENST00000549876 ADAMTSL1Q8N6G6 1762 aa1.52□□□□□ -2.17
CCDC38-208ENST00000549876 GRIN2BQ13224 1484 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms