RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MMP28Q9H239 520 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 LPAR2Q9HBW0 351 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 KCNIP2Q9NS61 270 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 HIF1ANQ9NWT6 349 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 PRNDQ9UKY0 176 aa3.9□□□□□ -1.78
SCAF11-212ENST00000549162 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV3-15A0A0B4J1V0 119 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 GPR137BO60478 399 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 DHFRP00374 187 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 IFNA2P01563 188 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TNFAIP6P98066 277 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-212ENST00000549162 KIAA0141Q14154 515 aaPredicted RBP3.9□□□□□ -1.79
SCAF11-212ENST00000549162 CDSNQ15517 529 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 SPATA31B1PQ5VZV4 182 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TRAPPC6BQ86SZ2 158 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TBC1D26Q86UD7 250 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 SAMD12Q8N8I0 201 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TNFAIP8L1Q8WVP5 186 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TSEN15Q8WW01 171 aaKnown RBP3.9□□□□□ -1.79
SCAF11-212ENST00000549162 GPR82Q96P67 336 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TBX15Q96SF7 602 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 PPDPFQ9H3Y8 114 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 TUBA4BQ9H853 241 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 FREM3P0C091 2139 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 MED13Q9UHV7 2174 aa3.9□□□□□ -1.79
SCAF11-212ENST00000549162 RPS10-NUDT3A0A1W2PQS6 291 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 SGCAQ16586 387 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 RPRMLQ8N4K4 120 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 FAM71F1Q96KD3 344 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 P2RX4Q99571 388 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PPA2Q9H2U2 334 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 VCX2Q9H322 139 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 OR51J1Q9H342 316 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 TPSG1Q9NRR2 321 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ONECUT1Q9UBC0 465 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 BCL2L11O43521 198 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 SYNGR1O43759 233 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV4-39P01824 125 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 IGHG2P01859 326 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 RNASE1P07998 156 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 MRPL3P09001 348 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 FAM157CP0CG43 387 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 EGR2P11161 476 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ANXA3P12429 323 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PRKACAP17612 351 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 DHRS2Q13268 280 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 LINC01356Q8N9X3 169 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 OR52B4Q8NGK2 314 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 COQ8AQ8NI60 647 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 MRPL32Q9BYC8 188 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PARP11Q9NR21 331 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 GAR1Q9NY12 217 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 CARHSP1Q9Y2V2 147 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 A0A1W2PN81 502 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 UMAD1C9J7I0 102 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 AP4M1O00189 453 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 CCL21O00585 134 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ANGPTL7O43827 346 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 SLC25A5P05141 298 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 MED14OSP0DP75 135 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 VPREB1P12018 145 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 SPNP16150 400 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 SERPINA2P20848 420 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PTNP21246 168 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 COL8A1P27658 744 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 CHRNA7P36544 502 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 OPCMLQ14982 345 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 LPAL2Q16609 132 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 C11orf87Q6NUJ2 197 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 MUC15Q8N387 334 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 OR5T2Q8NGG2 359 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ZC4H2Q9NQZ6 224 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ZNRD1Q9P1U0 126 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 LENEPQ9Y5L5 61 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ALG5Q9Y673 324 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 E5RGE8 158 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PRYO14603 147 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 GEMIN2O14893 280 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 TRAPPC6AO75865 159 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 KBTBD11O94819 623 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 S100A9P06702 114 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 ZNF728P0DKX0 622 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 NFYAP23511 347 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 COL10A1Q03692 680 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 PPP1R8Q12972 351 aaKnown RBP3.89□□□□□ -1.79
SCAF11-212ENST00000549162 RNF151Q2KHN1 245 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 AKIRIN2Q53H80 203 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 Q5PR19 223 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 DEFB108BQ8NET1 73 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 OR13D1Q8NGV5 346 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 DIRAS2Q96HU8 199 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 REG4Q9BYZ8 158 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 NSG2Q9Y328 171 aa3.89□□□□□ -1.79
SCAF11-212ENST00000549162 IGKV1D-8A0A087WSZ0 117 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 PSMD9O00233 223 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 RHBDL1O75783 438 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 RAB3DO95716 219 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CT45A6P0DMU7 189 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms