RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 NINJ1Q92982 152 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 DCTN5Q9BTE1 182 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 QTRT1Q9BXR0 403 aaKnown RBP11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 BOD1L1Q8NFC6 3051 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 NDUFB4O95168 129 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 GNB1P62873 340 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 CATR1Q13166 79 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 Q8N7P7 452 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 PATZ1Q9HBE1 687 aaKnown RBP11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 FZR1Q9UM11 496 aa11.81□□□□□ -0.52
RAPGEF3-218ENST00000548919 CLDN14O95500 239 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 C1QTNF9P0C862 333 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 IL3RAP26951 378 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 PDLIM4P50479 330 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 PEAR1Q5VY43 1037 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 LINC01551Q86U37 167 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 GCNT2Q8N0V5 402 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 ACY3Q96HD9 319 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 ABI3Q9P2A4 366 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 HCFC1P51610 2035 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 MLNRO43193 412 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 SP1P08047 785 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 SELLP14151 372 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 ACP1P24666 158 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 TAS2R60P59551 318 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 RNFT1Q5M7Z0 435 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 SDSLQ96GA7 329 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 SPRY4Q9C004 299 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
RAPGEF3-218ENST00000548919 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 LAMTOR5O43504 91 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 HNF1AP20823 631 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 SSTP61278 116 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 SLC10A1Q14973 349 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 OR13A1Q8NGR1 328 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 MRPL37Q9BZE1 423 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 FAM234AQ9H0X4 552 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 A0A0U1RQK1 487 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 ZNF320A2RRD8 509 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 IGHV3-13P01766 116 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 IGHV3-7P01780 117 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 CD82P27701 267 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 SRP14P37108 136 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 VWC2Q2TAL6 325 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 FIP1L1Q6UN15 594 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 C11orf53Q8IXP5 236 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 ZBTB34Q8NCN2 500 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 RAB29O14966 203 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 SOX15O60248 233 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 VENTXO95231 258 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 OR9G9P0C7N8 305 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 TCF23Q7RTU1 214 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 VKORC1L1Q8N0U8 176 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 CISD2Q8N5K1 135 aaKnown RBP11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 KLF14Q8TD94 323 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 HES4Q9HCC6 221 aa11.79□□□□□ -0.52
RAPGEF3-218ENST00000548919 NUPR1O60356 82 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 AGFG2O95081 481 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 GCGP01275 180 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 UBE2NP61088 152 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 MRPL49Q13405 166 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 ATP1A1-AS1Q5TC04 95 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 KCNIP4Q6PIL6 250 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 TMEM18Q96B42 140 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 CIB3Q96Q77 187 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 NDUFAF3Q9BU61 184 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 DDA1Q9BW61 102 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 RYDENQ9NUL5 291 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 C17orf112F2Z3M2 114 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 TYMSP04818 313 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 CD1BP29016 333 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 SLC35E4Q6ICL7 350 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 TGIF2LXQ8IUE1 241 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 PTPRBP23467 1997 aa11.78□□□□□ -0.52
RAPGEF3-218ENST00000548919 TRBV20OR9-2A0A075B6H5 130 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 IQCF6A8MYZ5 107 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 EREGO14944 169 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 RPL15P61313 204 aaKnown RBP11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 ARG2P78540 354 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 PAX5Q02548 391 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 EDDM3AQ14507 147 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 MSL2Q9HCI7 577 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
RAPGEF3-218ENST00000548919 A0A1W2PPV4 95 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms