RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 MROQ9BYG7 248 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 CCDC88CQ9P219 2028 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 HDGFL3Q9Y3E1 203 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 POLR3HQ9Y535 204 aaPredicted RBP0.68□□□□□ -2.3
CCDC38-206ENST00000548771 TIMM9Q9Y5J7 89 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 KIAA2026Q5HYC2 2103 aa0.68□□□□□ -2.3
CCDC38-206ENST00000548771 ARAP1Q96P48 1450 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 MALRD1Q5VYJ5 2156 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 BICRAQ9NZM4 1560 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 CREBL2O60519 120 aaPredicted RBP0.67□□□□□ -2.3
CCDC38-206ENST00000548771 ATP6V1G2O95670 118 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 ATP5G1P05496 136 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 RD3LP0DJH9 198 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 FXYD7P58549 80 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 GNA13Q14344 377 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 FAM45BPQ6NSW5 357 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 LYZL1Q6UWQ5 148 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 UNQ6190/PRO20217Q6UXQ8 127 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 FP248Q71RG6 208 aaPredicted RBP0.67□□□□□ -2.3
CCDC38-206ENST00000548771 SLC36A1Q7Z2H8 476 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 RPS19BP1Q86WX3 136 aaKnown RBP0.67□□□□□ -2.3
CCDC38-206ENST00000548771 CRLF3Q8IUI8 442 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 SPERTQ8NA61 448 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 OR1L8Q8NGR8 309 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 PPCDCQ96CD2 204 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 C19orf60Q96EN9 201 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 TTTY13Q9BZ97 58 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 C1orf109Q9NX04 203 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 ARHGEF11O15085 1522 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 TMEM94Q12767 1356 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 PCNTO95613 3336 aa0.67□□□□□ -2.3
CCDC38-206ENST00000548771 RTTNQ86VV8 2226 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 A0A0C4DFX4 3053 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 A0A087WUU8 490 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 HMSDA8MTL9 139 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 K7ERQ8 282 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 STX10O60499 249 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 MT-CO2P00403 227 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 HLA-DQB2P05538 268 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 SERPINA7P05543 415 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 ALDH3A1P30838 453 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 CCR7P32248 378 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 TAS2R20P59543 309 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 SNAP25P60880 206 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 AP1S1P61966 158 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 TBPL1P62380 186 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 HOXC5Q00444 222 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 SLAMF1Q13291 335 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 CDK5R1Q15078 307 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 MIAQ16674 131 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 LGALS9BQ3B8N2 356 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 OR10D3Q8NH80 312 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 ZNF675Q8TD23 568 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 IMMP2LQ96T52 175 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 CFAP45Q9UL16 551 aa0.66□□□□□ -2.3
CCDC38-206ENST00000548771 PCYT1BQ9Y5K3 369 aaPredicted RBP0.66□□□□□ -2.3
CCDC38-206ENST00000548771 THOC2Q8NI27 1593 aaKnown RBP0.66□□□□□ -2.3
CCDC38-206ENST00000548771 OR6C6A6NF89 314 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 F8VZ95 297 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 AZIN1O14977 448 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 ORC5O43913 435 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 BRI3O95415 125 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 PSMB8P28062 276 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 CA5AP35218 305 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 EMP1P54849 157 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 TPI1P60174 286 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 FABP5Q01469 135 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 C4orf26Q17RF5 130 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 HLA-DRB5Q30154 266 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 C7orf65Q6ZTY9 151 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 BOD1L2Q8IYS8 172 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 RNASE6Q93091 150 aaKnown RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 ZNF514Q96K75 400 aaPredicted RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 TMEM109Q9BVC6 243 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 TREM1Q9NP99 234 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 ZNHIT6Q9NWK9 470 aaKnown RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 KLK5Q9Y337 293 aaPredicted RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 ZFHX4Q86UP3 3567 aa0.65□□□□□ -2.31
CCDC38-206ENST00000548771 ZFHX2Q9C0A1 2572 aaPredicted RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 NUP153P49790 1475 aaKnown RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 GOLGB1Q14789 3259 aaKnown RBP0.65□□□□□ -2.31
CCDC38-206ENST00000548771 NESP48681 1621 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 IGKV2D-26A0A0A0MRZ7 120 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 TRAV38-1A0A0B4J264 116 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 IGHV1-18A0A0C4DH31 117 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 A0A0J9YW62 118 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 MKRN2OSH3BPM6 223 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 SMLR1H3BR10 107 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 H3BT86 120 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 H7C2G1 150 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 CCRL2O00421 344 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 YKT6O15498 198 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 NEMFO60524 1076 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 MRPS14O60783 128 aaKnown RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 CIAO1O76071 339 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 RPSAP08865 295 aaKnown RBP0.64□□□□□ -2.31
CCDC38-206ENST00000548771 DEFA4P12838 97 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 CXCL2P19875 107 aa0.64□□□□□ -2.31
CCDC38-206ENST00000548771 CXCL3P19876 107 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms