RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 RAB13P51153 203 aa23.2■■□□□ 1.3
BRF1-213ENST00000548421 ARHGDIBP52566 201 aa23.2■■□□□ 1.3
BRF1-213ENST00000548421 DHRS7BQ6IAN0 325 aaPredicted RBP23.2■■□□□ 1.3
BRF1-213ENST00000548421 UXS1Q8NBZ7 420 aa23.2■■□□□ 1.3
BRF1-213ENST00000548421 LHFPL5Q8TAF8 219 aa23.2■■□□□ 1.3
BRF1-213ENST00000548421 YAE1D1Q9NRH1 226 aa23.2■■□□□ 1.3
BRF1-213ENST00000548421 WASHC3Q9Y3C0 194 aa23.2■■□□□ 1.3
BRF1-213ENST00000548421 H7C2Y5 167 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 TIMM23O14925 209 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 PAX6P26367 422 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 PDPNQ86YL7 162 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 ZNF695Q8IW36 515 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 IL22RA2Q969J5 263 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 MED28Q9H204 178 aa23.19■■□□□ 1.3
BRF1-213ENST00000548421 PIGBOS1A0A0B4J2F0 54 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 A0A0U1RQK1 487 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 VGLL3A8MV65 326 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 HPRT1P00492 218 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 CD99P14209 185 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 FOSL1P15407 271 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 HABP2Q14520 560 aaPredicted RBP23.18■■□□□ 1.3
BRF1-213ENST00000548421 TMEM268Q5VZI3 342 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 CADM3Q8N126 398 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 CFHR4Q92496 578 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 RBPMSQ93062 196 aaKnown RBP23.18■■□□□ 1.3
BRF1-213ENST00000548421 PLEKHA2Q9HB19 425 aa23.18■■□□□ 1.3
BRF1-213ENST00000548421 IGHV3-72A0A0B4J1Y9 119 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 DBX1A6NMT0 343 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 S1PR2O95136 353 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 CRYZL1O95825 349 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 SELENOHQ8IZQ5 122 aaKnown RBP23.17■■□□□ 1.3
BRF1-213ENST00000548421 FAM96BQ9Y3D0 163 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 IGKV1-39P01597 117 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 IGKV1-16P04430 117 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 IGKV1D-39P04432 117 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 CD1BP29016 333 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 RRAS2P62070 204 aaPredicted RBP23.17■■□□□ 1.3
BRF1-213ENST00000548421 FAM120AOSQ5T036 256 aa23.17■■□□□ 1.3
BRF1-213ENST00000548421 MS4A7Q9GZW8 240 aaPredicted RBP23.17■■□□□ 1.3
BRF1-213ENST00000548421 SLC35G3Q8N808 338 aa23.16■■□□□ 1.3
BRF1-213ENST00000548421 OR4C13Q8NGP0 309 aa23.16■■□□□ 1.3
BRF1-213ENST00000548421 COMMD9Q9P000 198 aa23.16■■□□□ 1.3
BRF1-213ENST00000548421 DUXBA0A1W2PPF3 345 aa23.15■■□□□ 1.3
BRF1-213ENST00000548421 FBP1P09467 338 aa23.15■■□□□ 1.3
BRF1-213ENST00000548421 C9orf139Q6ZV77 190 aa23.15■■□□□ 1.3
BRF1-213ENST00000548421 FLYWCH2Q96CP2 140 aaKnown RBP23.15■■□□□ 1.3
BRF1-213ENST00000548421 SMR3AQ99954 134 aa23.15■■□□□ 1.3
BRF1-213ENST00000548421 MEGF9Q9H1U4 602 aa23.15■■□□□ 1.3
BRF1-213ENST00000548421 ATG12O94817 140 aa23.14■■□□□ 1.29
BRF1-213ENST00000548421 BRS3P32247 399 aa23.14■■□□□ 1.29
BRF1-213ENST00000548421 TMEM177Q53S58 311 aa23.14■■□□□ 1.29
BRF1-213ENST00000548421 LYZL2Q7Z4W2 148 aa23.14■■□□□ 1.29
BRF1-213ENST00000548421 OSR1Q8TAX0 266 aaPredicted RBP23.14■■□□□ 1.29
BRF1-213ENST00000548421 RAB18Q9NP72 206 aa23.14■■□□□ 1.29
BRF1-213ENST00000548421 VENTXO95231 258 aa23.13■■□□□ 1.29
BRF1-213ENST00000548421 LY6G6DO95868 133 aa23.13■■□□□ 1.29
BRF1-213ENST00000548421 HOXB5P09067 269 aa23.13■■□□□ 1.29
BRF1-213ENST00000548421 BCAP31P51572 246 aa23.13■■□□□ 1.29
BRF1-213ENST00000548421 RBMXL1Q96E39 390 aaKnown RBP23.13■■□□□ 1.29
BRF1-213ENST00000548421 TMEM160Q9NX00 188 aa23.13■■□□□ 1.29
BRF1-213ENST00000548421 SOX21Q9Y651 276 aaPredicted RBP23.13■■□□□ 1.29
BRF1-213ENST00000548421 ADAP1O75689 374 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 NQO2P16083 231 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 HNF1AP20823 631 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 FCN2Q15485 313 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 R3HDM4Q96D70 268 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 MGAT4CQ9UBM8 478 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 TMED3Q9Y3Q3 217 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 HIVEP1P15822 2718 aa23.12■■□□□ 1.29
BRF1-213ENST00000548421 MARCH11A6NNE9 402 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 GOSR2O14653 212 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 SHOXO15266 292 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 HRASP01112 189 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 KRASP01116 189 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 SULT1A3P0DMM9 295 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 SULT1A4P0DMN0 295 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 VDAC1P21796 283 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 AKR1C2P52895 323 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 C2orf68Q2NKX9 166 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 SEC22AQ96IW7 307 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 HARBI1Q96MB7 349 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 HMX3A6NHT5 357 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 FAM90A9PA6NNJ1 464 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 IFNA21P01568 189 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 IGKV1D-33P01593 117 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 IGKV1-33P01594 117 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 HLA-GP17693 338 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 G6PCP35575 357 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 IL17RELQ6ZVW7 336 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 BCL6BQ8N143 479 aaPredicted RBP23.11■■□□□ 1.29
BRF1-213ENST00000548421 RNASE11Q8TAA1 199 aaKnown RBP23.11■■□□□ 1.29
BRF1-213ENST00000548421 AIFM2Q9BRQ8 373 aa23.11■■□□□ 1.29
BRF1-213ENST00000548421 SONP18583 2426 aaKnown RBP23.1■■□□□ 1.29
BRF1-213ENST00000548421 NAV3Q8IVL0 2385 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 CCSO14618 274 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 IGKV1-5P01602 117 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 SNRNP70P08621 437 aaKnown RBP23.1■■□□□ 1.29
BRF1-213ENST00000548421 DYNLT3P51808 116 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 ERVK-16P61578 105 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 RPS16P62249 146 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms