RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 SPG11Q96JI7 2443 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 LRRC30A6NM36 301 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 RNF212BA8MTL3 300 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 FAM157AC9JC47 383 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 H1FXQ92522 213 aaKnown RBP9.15□□□□□ -0.94
CUX1-212ENST00000547394 SCRT1Q9BWW7 348 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 SAP30LQ9HAJ7 183 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 CACNA1AO00555 2505 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 E7EQL1 145 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 IFNA17P01571 189 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 SAA2P0DJI9 122 aaPredicted RBP9.15□□□□□ -0.94
CUX1-212ENST00000547394 IRF2P14316 349 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 GZMHP20718 246 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 TNFSF4P23510 183 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 DVL1P1P54792 670 aaPredicted RBP9.15□□□□□ -0.94
CUX1-212ENST00000547394 LY6DQ14210 128 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 ZNF525Q8N782 197 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 C14orf79Q96F83 325 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 WSB1Q9Y6I7 421 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 WNK2Q9Y3S1 2297 aa9.15□□□□□ -0.94
CUX1-212ENST00000547394 DSCAML1Q8TD84 2053 aa9.15□□□□□ -0.95
CUX1-212ENST00000547394 IFNA5P01569 189 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 SNRNP70P08621 437 aaKnown RBP9.14□□□□□ -0.95
CUX1-212ENST00000547394 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 SPSB3Q6PJ21 355 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 HINT2Q9BX68 163 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 RPRMQ9NS64 109 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 ZNF835Q9Y2P0 537 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 CENPEQ02224 2701 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 H7C2Y5 167 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 C1QTNF9P0C862 333 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 CFHR2P36980 270 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
CUX1-212ENST00000547394 SLC38A11Q08AI6 406 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 PPP1R35Q8TAP8 253 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 DTD1Q8TEA8 209 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 ISOC2Q96AB3 205 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 DYNLRB1Q9NP97 96 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 MLXQ9UH92 298 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
CUX1-212ENST00000547394 TRGV10A0A0A0MS01 117 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.14□□□□□ -0.95
CUX1-212ENST00000547394 M0R036 132 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 CCL21O00585 134 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 ADH4P08319 380 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 TMPRSS3P57727 454 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 HTD2P86397 168 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 TFF3Q07654 80 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 BAXQ07812 192 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 DMRTC2Q8IXT2 367 aaPredicted RBP9.14□□□□□ -0.95
CUX1-212ENST00000547394 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 SCGB1C1Q8TD33 95 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 RXFP4Q8TDU9 374 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 SEC11CQ9BY50 192 aa9.14□□□□□ -0.95
CUX1-212ENST00000547394 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.14□□□□□ -0.95
CUX1-212ENST00000547394 ZFHX3Q15911 3703 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 KBTBD11-OT1A0A1B0GTJ5 212 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 ZFP92A6NM28 416 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 SHISA9B4DS77 424 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 P0C879 139 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 GATA4P43694 442 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 TAS2R30P59541 319 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 DIAPH2-AS1Q14236 149 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 C1orf174Q8IYL3 243 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 HSPB7Q9UBY9 170 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 PUS1Q9Y606 427 aaKnown RBP eCLIP9.13□□□□□ -0.95
CUX1-212ENST00000547394 CACNA1BQ00975 2339 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 NAV3Q8IVL0 2385 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 ZNF788Q6ZQV5 615 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 ZNF561Q8N587 486 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 NUP37Q8NFH4 326 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 EDARADDQ8WWZ3 215 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 HSD17B10Q99714 261 aaKnown RBP9.13□□□□□ -0.95
CUX1-212ENST00000547394 ZNF665Q9H7R5 613 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 ELOVL5Q9NYP7 299 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 OR6C3Q9NZP0 311 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 JKAMPQ9P055 326 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 SLC25A10Q9UBX3 287 aaPredicted RBP9.13□□□□□ -0.95
CUX1-212ENST00000547394 JPT1Q9UK76 154 aa9.13□□□□□ -0.95
CUX1-212ENST00000547394 CARHSP1Q9Y2V2 147 aaKnown RBP9.13□□□□□ -0.95
CUX1-212ENST00000547394 SIAH2O43255 324 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 IGKV1D-33P01593 117 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 IGKV1-33P01594 117 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 SLC25A6P12236 298 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 RAB2AP61019 212 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 MSMO1Q15800 293 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 ABHD12Q8N2K0 398 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 SDSLQ96GA7 329 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 RPS10P5Q9NQ39 176 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 GFOD1Q9NXC2 390 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 TANC2Q9HCD6 1990 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 SMCO3A2RU48 225 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 UMAD1C9J7I0 102 aa9.12□□□□□ -0.95
CUX1-212ENST00000547394 CGB3P0DN86 165 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms