RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	ZNF418	Q8TF45	676 aa	Predicted RBP	2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	DCAKD	Q8WVC6	231 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	HIST1H2BA	Q96A08	127 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	GALNT14	Q96FL9	552 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	PGLYRP4	Q96LB8	373 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	HIST1H4G	Q99525	98 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	NRTN	Q99748	197 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	GNB1L	Q9BYB4	327 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	SMIM3	Q9BZL3	60 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	TMEM222	Q9H0R3	208 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	LPAR5	Q9H1C0	372 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	MED11	Q9P086	117 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	WASHC3	Q9Y3C0	194 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310		V9GY05	133 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	CPSF1	Q10570	1443 aa	Known RBP	2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	MYOM3	Q5VTT5	1437 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	ABCC10	Q5T3U5	1492 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	CACNA1S	Q13698	1873 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	MYH10	P35580	1976 aa		2.81	□□□□□ -1.96
LGR5-204	ENST00000547310	CLIP1	P30622	1438 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	PTPRK	Q15262	1439 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	IFITM5	A6NNB3	132 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ZNF850	A8MQ14	1090 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310		A8MWP6	167 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	LEUTX	A8MZ59	168 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310		C9JAW5	83 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	C8orf87	E5RJ46	101 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	XKRY	O14609	159 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	RBFOX2	O43251	390 aa	Known RBP eCLIP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	HCRTR1	O43613	425 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TRAF3IP2	O43734	574 aa	Predicted RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	SPAG7	O75391	227 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	OR2H2	O95918	312 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	CRYBA1	P05813	215 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	RPS4Y1	P22090	263 aa	Known RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	PRSS3	P35030	304 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	PSMB2	P49721	201 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ZNF140	P52738	457 aa	Predicted RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TAS2R20	P59543	309 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	RPS25	P62851	125 aa	Known RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	HLA-DRB3	P79483	266 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	CDK6	Q00534	326 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	MEF2C	Q06413	473 aa	Predicted RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ARFRP1	Q13795	201 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	CCL15	Q16663	113 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ZNF620	Q6ZNG0	422 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TCF23	Q7RTU1	214 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ZNF571	Q7Z3V5	609 aa	Predicted RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	OR8I2	Q8N0Y5	310 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TMEM252	Q8N6L7	170 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ZFP41	Q8N8Y5	198 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TMEM229B	Q8NBD8	167 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	FAM151A	Q8WW52	585 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TMEM106A	Q96A25	262 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TMEM159	Q96B96	161 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	ADAT3	Q96EY9	351 aa	Predicted RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	OR52B2	Q96RD2	323 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	SAMD10	Q9BYL1	202 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	OR2H1	Q9GZK4	316 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	SLIRP	Q9GZT3	109 aa	Known RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	SRMS	Q9H3Y6	488 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	CACYBP	Q9HB71	228 aa	Known RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	TMEM100	Q9NV29	134 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	RBFOX1	Q9NWB1	397 aa	Known RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	HIGD1A	Q9Y241	93 aa		2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	KLF13	Q9Y2Y9	288 aa	Predicted RBP	2.8	□□□□□ -1.96
LGR5-204	ENST00000547310	MAP3K1	Q13233	1512 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	IFT140	Q96RY7	1462 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	DCC	P43146	1447 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	TRO	Q12816	1431 aa	Predicted RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RRBP1	Q9P2E9	1410 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	IGLV1-36	A0A0B4J1U3	117 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	TRAV5	A0A0B4J249	113 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	PLAC8L1	A1L4L8	177 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RBMY1B	A6NDE4	496 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	PGP	A6NDG6	321 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RBMY1E	A6NEQ0	496 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RIIAD1	A6NNX1	92 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	KNCN	A6PVL3	124 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	KRBOX1	C9JBD0	128 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	CCL25	O15444	150 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	NDUFS5	O43920	106 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	GYPC	P04921	128 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	EIF4E	P06730	217 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	SOD3	P08294	240 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RBMY1D	P0C7P1	496 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RBMY1A1	P0DJD3	496 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	ERG	P11308	486 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	CPM	P14384	443 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	CTLA4	P16410	223 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	ZNF32	P17041	273 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	RBMX	P38159	391 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	LHX2	P50458	406 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	CCL23	P55773	120 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	PRR3	P79522	188 aa	Known RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	FABP5	Q01469	135 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	IFITM3	Q01628	133 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	LOXL1	Q08397	574 aa	Predicted RBP	2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	INCA1	Q0VD86	236 aa		2.79	□□□□□ -1.96
LGR5-204	ENST00000547310	C16orf72	Q14CZ0	275 aa		2.79	□□□□□ -1.96

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