RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FAM120AOSQ5T036 256 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 RBPMSQ93062 196 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 RNF5Q99942 180 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 MEGF9Q9H1U4 602 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 CSPG4Q6UVK1 2322 aa12.78□□□□□ -0.36
TRAFD1-203ENST00000547063 HRASP01112 189 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 SRP14P37108 136 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 DYNLT3P51808 116 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 AANATQ16613 207 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 ANKRD55Q3KP44 614 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 ZNF585BQ52M93 769 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 OR2B11Q5JQS5 317 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 THNSL2Q86YJ6 484 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 AJUBAQ96IF1 538 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 MED28Q9H204 178 aa12.77□□□□□ -0.37
TRAFD1-203ENST00000547063 A0A0U1RQK1 487 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 VGLL3A8MV65 326 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 RAMP3O60896 148 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 CRYZL1O95825 349 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 IFNA21P01568 189 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 FAM106CPP0CH98 169 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 NQO2P16083 231 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 LGALS7P47929 136 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 LINC00205P59089 165 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 ERVK-16P61578 105 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 TMEM177Q53S58 311 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 TMEM268Q5VZI3 342 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 LIN54Q6MZP7 749 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 FAM219AQ8IW50 185 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 CFHR4Q92496 578 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 RAB18Q9NP72 206 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
TRAFD1-203ENST00000547063 SHOXO15266 292 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 VENTXO95231 258 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 LY6G6DO95868 133 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 MOSP00540 346 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 VDAC1P21796 283 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 RPS16P62249 146 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 CLEC9AQ6UXN8 241 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 SELENOHQ8IZQ5 122 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 OR2T10Q8NGZ9 312 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 RNASE11Q8TAA1 199 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 C17orf50Q8WW18 174 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 RRNAD1Q96FB5 475 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 TSNAXQ99598 290 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 TEX15Q9BXT5 2789 aa12.75□□□□□ -0.37
TRAFD1-203ENST00000547063 ACANP16112 2415 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 IGHV3-72A0A0B4J1Y9 119 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 DBX1A6NMT0 343 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 S1PR2O95136 353 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 IGKV1-16P04430 117 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 AKR1C2P52895 323 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 RRAS2P62070 204 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 EBI3Q14213 229 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 LRRC75BQ2VPJ9 315 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 CADM3Q8N126 398 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 VSTM2AQ8TAG5 236 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 LSM10Q969L4 123 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 R3HDM4Q96D70 268 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 CDC42EP3Q9UKI2 254 aa12.74□□□□□ -0.37
TRAFD1-203ENST00000547063 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 KRASP01116 189 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 IGKV1D-33P01593 117 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 IGKV1-33P01594 117 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 HLA-GP17693 338 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 HES1Q14469 280 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 POU2AF1Q16633 256 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 VMA21Q3ZAQ7 101 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 SLC35G3Q8N808 338 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 DMBX1Q8NFW5 382 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 SEC22AQ96IW7 307 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 RHOVQ96L33 236 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 SPIN2AQ99865 258 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 SPIN2BQ9BPZ2 258 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 ZANQ9Y493 2812 aa12.73□□□□□ -0.37
TRAFD1-203ENST00000547063 OTOGQ6ZRI0 2925 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 NAV3Q8IVL0 2385 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 CSMD1Q96PZ7 3565 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 hCG_2014768A0A024R1R8 64 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 HMX3A6NHT5 357 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 SPDEFO95238 335 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 IGKV1-39P01597 117 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 IGKV1D-39P04432 117 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 TRAPPC2P0DI81 140 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 TRAPPC2BP0DI82 140 aa12.72□□□□□ -0.37
TRAFD1-203ENST00000547063 H2BFWTQ7Z2G1 175 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms