RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 LPCAT3Q6P1A2 487 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 DDB2Q92466 427 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 HARBI1Q96MB7 349 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 CLCC1Q96S66 551 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 GPHA2Q96T91 129 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 METTL1Q9UBP6 276 aaKnown RBP13.31□□□□□ -0.28
LTBR-215ENST00000546296 LINC00527Q9UJ94 153 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 AP4M1O00189 453 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 GSTZ1O43708 216 aaPredicted RBP13.3□□□□□ -0.28
LTBR-215ENST00000546296 SLC25A17O43808 307 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 RAB3DO95716 219 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 GNRHRP30968 328 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 TMEM177Q53S58 311 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 SPANXN2Q5MJ10 180 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 STEAP1BQ6NZ63 245 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 ZNF818PQ6ZRF7 136 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 CMTM1Q8IZ96 169 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 CHPT1Q8WUD6 406 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 NOL4LQ96MY1 436 aaPredicted RBP13.3□□□□□ -0.28
LTBR-215ENST00000546296 HSPB9Q9BQS6 159 aa13.3□□□□□ -0.28
LTBR-215ENST00000546296 PSMB11A5LHX3 300 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 FBXO24O75426 580 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 SPDEFO95238 335 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 HLA-DRB1P01911 266 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 CD28P10747 220 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 S100GP29377 79 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 SLC35B1P78383 322 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 CATR1Q13166 79 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 EIF4EBP1Q13541 118 aaPredicted RBP13.29□□□□□ -0.28
LTBR-215ENST00000546296 MEF2DQ14814 521 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 CCDC190Q86UF4 302 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 ARRDC1Q8N5I2 433 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 OR6Q1Q8NGQ2 317 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 OR4S2Q8NH73 311 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 THAP7Q9BT49 309 aaPredicted RBP13.29□□□□□ -0.28
LTBR-215ENST00000546296 FXYD6Q9H0Q3 95 aa13.29□□□□□ -0.28
LTBR-215ENST00000546296 GPR31O00270 319 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 FCN1O00602 326 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 CD74P04233 296 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 PGAM2P15259 253 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 VMA21Q3ZAQ7 101 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 SCGB2B2Q4G0G5 96 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 AADACL3Q5VUY0 350 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 STPG2Q8N412 459 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 POC5Q8NA72 575 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 OR4D10Q8NGI6 311 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 OR51H1Q8NH63 302 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
LTBR-215ENST00000546296 ABHD5Q8WTS1 349 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 GON7Q9BXV9 100 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 OR51J1Q9H342 316 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 PARP11Q9NR21 331 aa13.28□□□□□ -0.28
LTBR-215ENST00000546296 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 A6NHS1 94 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 SRRM4A7MD48 611 aaKnown RBP13.27□□□□□ -0.29
LTBR-215ENST00000546296 DISC1C4P0D8 188 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 PGLYRP1O75594 196 aaPredicted RBP13.27□□□□□ -0.29
LTBR-215ENST00000546296 AKAIN1P0CW23 69 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 VDAC1P21796 283 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 PTBP1P26599 531 aaKnown RBP eCLIP13.27□□□□□ -0.29
LTBR-215ENST00000546296 PHLDA2Q53GA4 152 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 HIST2H2BDQ6DRA6 164 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 ZNF329Q86UD4 541 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 SLC38A6Q8IZM9 456 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 SPAG16Q8N0X2 631 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 Q8N402 240 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 OR4X2Q8NGF9 303 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 SGMS2Q8NHU3 365 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 V9GYH0 126 aa13.27□□□□□ -0.29
LTBR-215ENST00000546296 M0QZ24 198 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 CNIH1O95406 144 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 IGLV2-23P01705 113 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 RLN1P04808 185 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 UCP3P55916 312 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 UBE2KP61086 200 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 GNB1P62873 340 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 CX3CL1P78423 397 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 PPP1R27Q86WC6 154 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 TEX45Q8NA69 505 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 TERB2Q8NHR7 220 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 WIPF2Q8TF74 440 aaPredicted RBP13.26□□□□□ -0.29
LTBR-215ENST00000546296 RSRP1Q9BUV0 290 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 TPSG1Q9NRR2 321 aa13.26□□□□□ -0.29
LTBR-215ENST00000546296 TCRBV4S1A1TA0A5B7 111 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 CA2P00918 260 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 HRASP01112 189 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 IGF1P05019 195 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 ETV6P41212 452 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 C10orf99Q6UWK7 81 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 ZNF562Q6V9R5 426 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 OR4C16Q8NGL9 310 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 CD300LFQ8TDQ1 290 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 CITED2Q99967 270 aaPredicted RBP13.25□□□□□ -0.29
LTBR-215ENST00000546296 WSB1Q9Y6I7 421 aa13.25□□□□□ -0.29
LTBR-215ENST00000546296 ATP6V0E1O15342 81 aa13.24□□□□□ -0.29
LTBR-215ENST00000546296 RAMP3O60896 148 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms