RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CELA3AP09093 270 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF343Q6P1L6 599 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 PNKDQ8N490 385 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 STXBP6Q8NFX7 210 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 OR5AP2Q8NGF4 316 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 ZPLD1Q8TCW7 415 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM37Q8WXS4 190 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 SS18L1O75177 396 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-218ENST00000545889 HLA-GP17693 338 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 CD81P60033 236 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 SSBP1Q04837 148 aaKnown RBP7.38□□□□□ -1.23
CLIP1-218ENST00000545889 BSPH1Q075Z2 132 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 HERPUD1Q15011 391 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 DEFB121Q5J5C9 76 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 DNM1P46Q6ZS02 220 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 RNF133Q8WVZ7 376 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 FAM210BQ96KR6 192 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 PRDM13Q9H4Q3 707 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 GP6Q9HCN6 339 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 TNFSF18Q9UNG2 199 aa7.38□□□□□ -1.23
CLIP1-218ENST00000545889 RCL1Q9Y2P8 373 aaKnown RBP7.38□□□□□ -1.23
CLIP1-218ENST00000545889 LOC102723996A0A087X1L8 192 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H1EP10412 219 aaKnown RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 UBE2L3P68036 154 aaKnown RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 CD300LDQ6UXZ3 194 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 CALHM1Q8IU99 346 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 STPG3Q8N7X2 389 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 C3orf85A0A1B0GTC6 90 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 J3QR06 171 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 NTF3P20783 257 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 H3F3AP84243 136 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 DHRS2Q13268 280 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 LIAT1Q6ZQX7 453 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 MMD2Q8IY49 270 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 ABHD12Q8N2K0 398 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 OR1L6Q8NGR2 347 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 CABLES2Q9BTV7 478 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 FBXL17Q9UF56 701 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 C9orf170A2RU37 121 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 PPP5D1E7EU14 171 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 IFI6P09912 130 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 FOLR2P14207 255 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 KIR3DL2P43630 455 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 LYG2Q86SG7 212 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 NR2C2APQ86WQ0 139 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 SLC26A10Q8NG04 563 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 OR4A4PQ8NGN8 299 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 EAF1Q96JC9 268 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 CLEC7AQ9BXN2 247 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF703Q9H7S9 590 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 SH2D2AQ9NP31 389 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 PAM16Q9Y3D7 125 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 IGKV1D-42A0A075B6H8 117 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 ORM1P02763 201 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 MMP16P51512 607 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 RPUSD3Q6P087 351 aaKnown RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF66Q6ZN08 573 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 Q8NFD4 153 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 WFIKKN1Q96NZ8 548 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 SLC17A5Q9NRA2 495 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 CLCF1Q9UBD9 225 aa7.37□□□□□ -1.23
CLIP1-218ENST00000545889 MRM2Q9UI43 246 aaKnown RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 SIRT4Q9Y6E7 314 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-218ENST00000545889 ZGRF1Q86YA3 2104 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ANKRD20A5PA0PJZ0 165 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 TRGC1P0CF51 173 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 PGA4P0DJD7 388 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 PGA5P0DJD9 388 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 LIMS1P48059 325 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 AMTP48728 403 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 Q0VFX4 171 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 FFAR4Q5NUL3 377 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 PDPNQ86YL7 162 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 OR9G1Q8NH87 305 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 IL22RA2Q969J5 263 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 METTL26Q96S19 204 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 SNHG12Q9BXW3 62 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM106BQ9NUM4 274 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 G3V3Q6 166 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 CLPSP04118 112 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 SOD3P08294 240 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 HLA-DRB3P79483 266 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 EGR4Q05215 589 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM229BQ8NBD8 167 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 Q9N2K0 584 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 TGIF2-C20orf24A0A0A6YYL0 155 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 OR2T8A6NH00 312 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 PROB1E7EW31 1015 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 WNT9BO14905 357 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 COL5A1-AS1Q5SY13 56 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF664Q8N3J9 261 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM131Q92545 1883 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF426Q9BUY5 554 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 SSBP3Q9BWW4 388 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF106Q9H2Y7 1883 aaKnown RBP7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ANXA10Q9UJ72 324 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms