RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OR4A5Q8NH83 315 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 TP53RKQ96S44 253 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 SH3BGRL3Q9H299 93 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 TCF19Q9Y242 345 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 ZG16O60844 167 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 IZUMO4Q1ZYL8 232 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 QTRT1Q9BXR0 403 aaKnown RBP10.69□□□□□ -0.7
COL4A6-209ENST00000545689 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
COL4A6-209ENST00000545689 ZMAT5Q9UDW3 170 aaKnown RBP10.69□□□□□ -0.7
COL4A6-209ENST00000545689 CCL1P22362 96 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 OR4C13Q8NGP0 309 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 TMEM74BQ9NUR3 256 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 UCP1P25874 307 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 STPG3Q8N7X2 389 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 VN1R17PQ8TDU5 208 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 VWCEQ96DN2 955 aa10.69□□□□□ -0.7
COL4A6-209ENST00000545689 A8MXK9 166 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 H0YL77 283 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 TIMP4Q99727 224 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 RARRES2Q99969 163 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 PCGF1Q9BSM1 259 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 TNFRSF19Q9NS68 423 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 CDX1P47902 265 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-209ENST00000545689 RAB9AP51151 201 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 ABLIM2Q6H8Q1 611 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 TMEM208Q9BTX3 173 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 OR51M1Q9H341 326 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 A0A1W2PS18 150 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 AGAP20933 346 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 CEBPDP49716 269 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-209ENST00000545689 TMPRSS3P57727 454 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 ECSCRQ19T08 205 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 LAMTOR1Q6IAA8 161 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 RTBDNQ9BSG5 229 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-209ENST00000545689 NYNRINQ9P2P1 1898 aaKnown RBP10.68□□□□□ -0.7
COL4A6-209ENST00000545689 ARL14EPLP0DKL9 152 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 KIR2DL2P43627 348 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-209ENST00000545689 EFNB1P98172 346 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 HIST1H2BAQ96A08 127 aa10.68□□□□□ -0.7
COL4A6-209ENST00000545689 A0A1B0GTI1 187 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 PQLC2LA1A4F0 135 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 TM4SF5O14894 197 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 C2orf68Q2NKX9 166 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 COL25A1Q9BXS0 654 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-209ENST00000545689 TGIF2-C20orf24A0A0A6YYL0 155 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 ZIC3O60481 467 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 MFAP4P55083 255 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
COL4A6-209ENST00000545689 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
COL4A6-209ENST00000545689 AURKAIP1Q9NWT8 199 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-209ENST00000545689 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-209ENST00000545689 BTCP35070 178 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 IMMP1LQ96LU5 166 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 LOC102723996A0A087X1L8 192 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 GCSHP23434 173 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 TIMM23BQ5SRD1 257 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 ACP7Q6ZNF0 438 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 METTL26Q96S19 204 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 MRPL13Q9BYD1 178 aaKnown RBP10.67□□□□□ -0.7
COL4A6-209ENST00000545689 NINQ8N4C6 2090 aa10.67□□□□□ -0.7
COL4A6-209ENST00000545689 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 GATAD1Q8WUU5 269 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 ZSWIM8A7E2V4 1837 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 IGKV1D-43A0A0B4J1Z2 117 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 KLF7O75840 302 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-209ENST00000545689 RND2P52198 227 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 SPANXN1Q5VSR9 72 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 HSPB9Q9BQS6 159 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 PARLQ9H300 379 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 PAM16Q9Y3D7 125 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 A0A0B4J293 547 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 PCSK4Q6UW60 755 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 OR8A1Q8NGG7 326 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 OR51G1Q8NGK1 321 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 PRR7Q8TB68 274 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 HSPB7Q9UBY9 170 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 PGPA6NDG6 321 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
COL4A6-209ENST00000545689 TMEM56-RWDD3S4R434 201 aa10.66□□□□□ -0.7
COL4A6-209ENST00000545689 AREGP15514 252 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 GLRXP35754 106 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 ZNF137PP52743 207 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 LINC00518Q8N0U6 118 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 GTF3AQ92664 365 aaKnown RBP10.65□□□□□ -0.7
COL4A6-209ENST00000545689 FOXD3Q9UJU5 478 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-209ENST00000545689 RNF115Q9Y4L5 304 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 A0A087WWC5 75 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 C1QL2Q7Z5L3 287 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 FOXJ2Q9P0K8 574 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 RHBDL1O75783 438 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 MGPP08493 103 aa10.65□□□□□ -0.7
COL4A6-209ENST00000545689 GCHFRP30047 84 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms