RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 FAM212BQ9NTI7 297 aaPredicted RBP9.49□□□□□ -0.89
LTBR-214ENST00000545445 COPZ2Q9P299 210 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 WASHC3Q9Y3C0 194 aa9.49□□□□□ -0.89
LTBR-214ENST00000545445 H0YJW9 148 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
LTBR-214ENST00000545445 PGLYRP1O75594 196 aaPredicted RBP9.48□□□□□ -0.89
LTBR-214ENST00000545445 B3GALNT1O75752 331 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 MOSP00540 346 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 IGHV4-59P01825 116 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 SNRNP70P08621 437 aaKnown RBP9.48□□□□□ -0.89
LTBR-214ENST00000545445 PAX6P26367 422 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 RPL15P61313 204 aaKnown RBP9.48□□□□□ -0.89
LTBR-214ENST00000545445 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 DRAXINQ8NBI3 349 aaPredicted RBP9.48□□□□□ -0.89
LTBR-214ENST00000545445 OR8H1Q8NGG4 311 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 PIFOQ8TCI5 191 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 TCTEX1D2Q8WW35 142 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 DDB2Q92466 427 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 MRGPRFQ96AM1 343 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 SLC2A9Q9NRM0 540 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 SLC35D1Q9NTN3 355 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 LIN7CQ9NUP9 197 aaKnown RBP9.48□□□□□ -0.89
LTBR-214ENST00000545445 VPREB3Q9UKI3 123 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 TCF19Q9Y242 345 aa9.48□□□□□ -0.89
LTBR-214ENST00000545445 IGHV3-72A0A0B4J1Y9 119 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 FAM240BA0A1B0GVZ2 78 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 A6NDX4 124 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 H7C2Y5 167 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 M0QZK8 103 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 MPPED1O15442 326 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 RBFOX2O43251 390 aaKnown RBP eCLIP9.47□□□□□ -0.89
LTBR-214ENST00000545445 NDUFB6O95139 128 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 IGKV1D-33P01593 117 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 IGKV1-33P01594 117 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 SLC6A1P30531 599 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 PIGPP57054 158 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 IFITM3Q01628 133 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 HES1Q14469 280 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 SLC9A3R2Q15599 337 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 PHLDA2Q53GA4 152 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 OR4C13Q8NGP0 309 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 OR4S2Q8NH73 311 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 FLYWCH2Q96CP2 140 aaKnown RBP9.47□□□□□ -0.89
LTBR-214ENST00000545445 EAF1Q96JC9 268 aaPredicted RBP9.47□□□□□ -0.89
LTBR-214ENST00000545445 AIFM2Q9BRQ8 373 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 C1RLQ9NZP8 487 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
LTBR-214ENST00000545445 LINC00473A8K010 186 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 TNFSF12O43508 249 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 OR2F2O95006 317 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 TMEM11P17152 192 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 F2RP25116 425 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 BTCP35070 178 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 LGALS7P47929 136 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 CCR6P51684 374 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 TAS2R31P59538 309 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 RPL30P62888 115 aaKnown RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 DCTN2Q13561 401 aaKnown RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 GLDNQ6ZMI3 551 aaPredicted RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 TBC1D26Q86UD7 250 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 OR51H1Q8NH63 302 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 OSR1Q8TAX0 266 aaPredicted RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 RBM14Q96PK6 669 aaKnown RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 TSNAXQ99598 290 aaKnown RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 RTBDNQ9BSG5 229 aaPredicted RBP9.46□□□□□ -0.9
LTBR-214ENST00000545445 C5orf66Q9H5L9 145 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 VSIG4Q9Y279 399 aa9.46□□□□□ -0.9
LTBR-214ENST00000545445 PIGBOS1A0A0B4J2F0 54 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 FCGR3BO75015 233 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 SPDEFO95238 335 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 RLN1P04808 185 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 RPA2P15927 270 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 PI3P19957 117 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 CD24P25063 80 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 UBE2MP61081 183 aaKnown RBP9.45□□□□□ -0.9
LTBR-214ENST00000545445 TMEM177Q53S58 311 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 SPAG16Q8N0X2 631 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 CENPSQ8N2Z9 138 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 Q8N6K4 173 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 ENKURQ8TC29 256 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 CHIAQ9BZP6 476 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 KCNIP3Q9Y2W7 256 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 MOB4Q9Y3A3 225 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
LTBR-214ENST00000545445 TEX13DA0A0J9YY54 714 aaPredicted RBP9.44□□□□□ -0.9
LTBR-214ENST00000545445 C3orf85A0A1B0GTC6 90 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 CRYM-AS1A6NIL9 109 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 H0Y980 276 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 M0QZ24 198 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 SHOXO15266 292 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 FGF16O43320 207 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 CRYZL1O95825 349 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 HPRT1P00492 218 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 HRASP01112 189 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 IGKV1-16P04430 117 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 TCRBP04435 133 aa9.44□□□□□ -0.9
LTBR-214ENST00000545445 SERPINE2P07093 398 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms