RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 C1orf100Q5SVJ3 147 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 ZNF57Q68EA5 555 aaPredicted RBP10.93□□□□□ -0.66
RTN3-214ENST00000545432 KIR2DL5AQ8N109 375 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 Q9N2K0 584 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 MLXQ9UH92 298 aa10.93□□□□□ -0.66
RTN3-214ENST00000545432 MUC4Q99102 2169 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 A0A1B0GVY2 172 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 A0A1W2PPK0 400 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 WBP4O75554 376 aaKnown RBP10.92□□□□□ -0.66
RTN3-214ENST00000545432 OR2C1O95371 312 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 SCTP09683 121 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 UBE2KP61086 200 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 HLA-DRB3P79483 266 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 TMEM217Q8N7C4 229 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 OR52B4Q8NGK2 314 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 SRSF12Q8WXF0 261 aaKnown RBP10.92□□□□□ -0.66
RTN3-214ENST00000545432 THRSPQ92748 146 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 HARBI1Q96MB7 349 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 CLEC2DQ9UHP7 191 aa10.92□□□□□ -0.66
RTN3-214ENST00000545432 LOC100130705A0A1B0GUX0 176 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
RTN3-214ENST00000545432 TMEM14DPA8MWL7 114 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 M0R1X1 148 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 PRH1P02810 166 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 MED14OSP0DP75 135 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 MAP2K4P45985 399 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 UNC119Q13432 240 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 SMN1Q16637 294 aaKnown RBP10.91□□□□□ -0.66
RTN3-214ENST00000545432 C1orf146Q5VVC0 180 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 OR10K2Q6IF99 312 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 FAM89BQ8N5H3 189 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 NICN1Q9BSH3 213 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 RDH8Q9NYR8 311 aa10.91□□□□□ -0.66
RTN3-214ENST00000545432 DIMT1Q9UNQ2 313 aaKnown RBP10.91□□□□□ -0.66
RTN3-214ENST00000545432 EXOSC1Q9Y3B2 195 aaKnown RBP10.91□□□□□ -0.66
RTN3-214ENST00000545432 A0A0A6YYD4 124 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 PPP5D1E7EU14 171 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 HLA-AP01891 365 aaKnown RBP10.9□□□□□ -0.66
RTN3-214ENST00000545432 APELAP0DMC3 54 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 RRASP10301 218 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 APOC4P55056 127 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 TCTAP57738 103 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 C15orf32Q32M92 178 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 GLT8D1Q68CQ7 371 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 CBR4Q8N4T8 237 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 CACNG8Q8WXS5 425 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 C5orf30Q96GV9 206 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 PHB2Q99623 299 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 HDHD3Q9BSH5 251 aaPredicted RBP10.9□□□□□ -0.66
RTN3-214ENST00000545432 TMEM59Q9BXS4 323 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 CHMP1AQ9HD42 196 aaPredicted RBP10.9□□□□□ -0.66
RTN3-214ENST00000545432 PLEKHJ1Q9NW61 149 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 SDHAF2Q9NX18 166 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 AK3Q9UIJ7 227 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 HSF4Q9ULV5 492 aa10.9□□□□□ -0.66
RTN3-214ENST00000545432 SHOXO15266 292 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 SRMP19623 302 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 TMEM50BP56557 158 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 TNXAQ16473 311 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 LPAR5Q9H1C0 372 aa10.89□□□□□ -0.67
RTN3-214ENST00000545432 IRGMA1A4Y4 181 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 DIRAS3O95661 229 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 SERPINB10P48595 397 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 VMA21Q3ZAQ7 101 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 FAM106AQ4KMX7 169 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 OR4A47Q6IF82 309 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 LRRTM1Q86UE6 522 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 SLC25A42Q86VD7 318 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 ZFP41Q8N8Y5 198 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 SETD6Q8TBK2 473 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 CCDC140Q96MF4 163 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 FANCD2OSQ96PS1 177 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
RTN3-214ENST00000545432 TEX22C9J3V5 150 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 SOCS1O15524 211 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 OR2J3O76001 311 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 SCAF4O95104 1147 aaKnown RBP10.87□□□□□ -0.67
RTN3-214ENST00000545432 BPNT1O95861 308 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 GALP22466 123 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 PSMB6P28072 239 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 TAS2R43P59537 309 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 RTL8BQ17RB0 113 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 OR2C3Q8N628 320 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 OSR1Q8TAX0 266 aaPredicted RBP10.87□□□□□ -0.67
RTN3-214ENST00000545432 CABLES2Q9BTV7 478 aa10.87□□□□□ -0.67
RTN3-214ENST00000545432 ZNF430Q9H8G1 570 aaPredicted RBP10.87□□□□□ -0.67
RTN3-214ENST00000545432 NPIPB5A8MRT5 1133 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 TRDCB7Z8K6 153 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 CRYGCP07315 174 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 MAPK3P27361 379 aaPredicted RBP10.86□□□□□ -0.67
RTN3-214ENST00000545432 DUTP33316 252 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms