RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 HSPB9Q9BQS6 159 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 ZFP30Q9Y2G7 519 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 IGKV3D-15A0A087WSY6 115 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 SNURFLB1AK76 121 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 NDUFB3O43676 98 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 DEFA4P12838 97 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 UCP1P25874 307 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 CHRNB4P30926 498 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 GLIPR1P48060 266 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 WFDC1Q9HC57 220 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 RNF7Q9UBF6 113 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 IL36RNQ9UBH0 155 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
VPS50-220ENST00000544910 C9orf172C9J069 976 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 HOXA5P20719 270 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 TMEM42Q69YG0 159 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 OR5R1Q8NH85 324 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 WDYHV1Q96HA8 205 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 hADV38S2A0JD32 116 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 MKRN2OSH3BPM6 223 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 CORTO00230 105 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 NEURL1O76050 574 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 CLDN14O95500 239 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 ZNF506Q5JVG8 444 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 GFRALQ6UXV0 394 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 ZNF826PQ6ZT77 177 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 OR1L4Q8NGR5 311 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 SPSB4Q96A44 273 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 WBP1Q96G27 269 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 ZNF665Q9H7R5 613 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 TRBV9A0A0B4J1U6 114 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 SPAARA0A1B0GVQ0 90 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
VPS50-220ENST00000544910 OTX1P32242 354 aaPredicted RBP4.92□□□□□ -1.62
VPS50-220ENST00000544910 HINT1P49773 126 aaPredicted RBP4.92□□□□□ -1.62
VPS50-220ENST00000544910 GFRA1P56159 465 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 TNFRSF9Q07011 255 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 SLC35E4Q6ICL7 350 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 SPNS3Q6ZMD2 512 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 FGFRL1Q8N441 504 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 CBLN4Q9NTU7 201 aa4.92□□□□□ -1.62
VPS50-220ENST00000544910 TECRQ9NZ01 308 aaKnown RBP4.92□□□□□ -1.62
VPS50-220ENST00000544910 NKX2-8O15522 239 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IGHV3-13P01766 116 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IGHV3-7P01780 117 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 TRGC1P0CF51 173 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 MRPS11P82912 194 aaKnown RBP4.91□□□□□ -1.62
VPS50-220ENST00000544910 TMEM108Q6UXF1 575 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 NDUFAF3Q9BU61 184 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 AHRRA9YTQ3 701 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 UBE2CO00762 179 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 CXorf1O96002 111 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 CA2P00918 260 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 FTH1P19P0C7X4 201 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IER3P46695 156 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 RIGQ13278 110 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 GAMTQ14353 236 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 DRAM1Q8N682 238 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 TAF15Q92804 592 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS50-220ENST00000544910 OR2V2Q96R30 315 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 PSMG3Q9BT73 122 aaPredicted RBP4.91□□□□□ -1.62
VPS50-220ENST00000544910 ABHD14AQ9BUJ0 271 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 KLK10O43240 276 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 SPINK4O60575 86 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 PAGE4O60829 102 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 SS18L1O75177 396 aaPredicted RBP4.91□□□□□ -1.62
VPS50-220ENST00000544910 P2RY6Q15077 328 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 DMRTA1Q5VZB9 504 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 ZNF324BQ6AW86 544 aaPredicted RBP4.91□□□□□ -1.62
VPS50-220ENST00000544910 ASCL4Q6XD76 172 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 ERASQ7Z444 233 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 GCSAMQ8N6F7 178 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 TMEM105Q8N8V8 129 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 SRD5A3Q9H8P0 318 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 PEF1Q9UBV8 284 aaKnown RBP4.91□□□□□ -1.62
VPS50-220ENST00000544910 SPAG17Q6Q759 2223 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 A0A087WWC5 75 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IGKV1D-13A0A0B4J2D9 117 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 A0A1W2PN81 502 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IQCF6A8MYZ5 107 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 S1PR2O95136 353 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 RNF224P0DH78 156 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IGKV1-13P0DP09 117 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 IGHV1-2P23083 117 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 VMA21Q3ZAQ7 101 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 Q56UQ5 140 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 SLC25A34Q6PIV7 304 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 ACP7Q6ZNF0 438 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 Q6ZT83 130 aa4.91□□□□□ -1.62
VPS50-220ENST00000544910 BARX1Q9HBU1 254 aaPredicted RBP4.91□□□□□ -1.62
VPS50-220ENST00000544910 TGIF2-C20orf24A0A0A6YYL0 155 aa4.9□□□□□ -1.62
VPS50-220ENST00000544910 C5orf52A6NGY3 159 aa4.9□□□□□ -1.62
VPS50-220ENST00000544910 HLA-DQA1P01909 254 aa4.9□□□□□ -1.62
VPS50-220ENST00000544910 SLC25A5P05141 298 aaKnown RBP4.9□□□□□ -1.62
VPS50-220ENST00000544910 CD1BP29016 333 aa4.9□□□□□ -1.62
VPS50-220ENST00000544910 TPRX1Q8N7U7 411 aa4.9□□□□□ -1.62
VPS50-220ENST00000544910 SGMS2Q8NHU3 365 aa4.9□□□□□ -1.62
VPS50-220ENST00000544910 GTF3AQ92664 365 aaKnown RBP4.9□□□□□ -1.62
VPS50-220ENST00000544910 C1orf147Q96MC9 270 aaPredicted RBP4.9□□□□□ -1.62
VPS50-220ENST00000544910 PROK2Q9HC23 129 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms