RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	THSD7A	Q9UPZ6	1657 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	TEX50	A0A1B0GTY4	177 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	OR6C6	A6NF89	314 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	FABP12	A6NFH5	140 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	BHLHE40	O14503	412 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	BPGM	P07738	259 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	PSMB6	P28072	239 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	RPL27A	P46776	148 aa	Known RBP	1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	GABRA2	P47869	451 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	HOXC5	Q00444	222 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	OR10K2	Q6IF99	312 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	CD302	Q8IX05	232 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	SPZ1	Q9BXG8	430 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	MRPL32	Q9BYC8	188 aa	Known RBP	1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	TMEM222	Q9H0R3	208 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	POLR3H	Q9Y535	204 aa	Predicted RBP	1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639		A0A087WUU8	490 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	TINCR	A0A1B0GVN0	87 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639		A8MUN3	132 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	TXNDC9	O14530	226 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	ATP8B1	O43520	1251 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	CALU	O43852	315 aa	Predicted RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	NAPSA	O96009	420 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	HIST1H1C	P16403	213 aa	Known RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	RPS24	P62847	133 aa	Known RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	EBP	Q15125	230 aa	Known RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	FAM201A	Q5SY85	155 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	LRRC28	Q86X40	367 aa	Predicted RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	C10orf126	Q8N4M7	172 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	ASB13	Q8WXK3	278 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	TIPIN	Q9BVW5	301 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	TAAR3P	Q9P1P4	343 aa		1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	FLG2	Q5D862	2391 aa	Predicted RBP	1.23	□□□□□ -2.21
RAP1B-231	ENST00000544639	IGHV3-64	A0A075B6Q5	118 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	HPGDS	O60760	199 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	ARL14EPL	P0DKL9	152 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	CCR2	P41597	374 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	EMP2	P54851	167 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	TBPL1	P62380	186 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	HLA-DRB3	P79483	266 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	GLO1	Q04760	184 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	SLC38A11	Q08AI6	406 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	JOSD1	Q15040	202 aa	Predicted RBP	1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	FUNDC1	Q8IVP5	155 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	OR13C8	Q8NGS7	320 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	ASB17	Q8WXJ9	295 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	CFAP53	Q96M91	514 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	NAA38	Q9BRA0	125 aa	Known RBP	1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	DCUN1D5	Q9BTE7	237 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	TMEM109	Q9BVC6	243 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	VCX3B	Q9H321	246 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	HES4	Q9HCC6	221 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	SPANXB1	Q9NS25	103 aa	Predicted RBP	1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	BABAM2	Q9NXR7	383 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	GMEB1	Q9Y692	573 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	MALRD1	Q5VYJ5	2156 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	GRIN2B	Q13224	1484 aa		1.22	□□□□□ -2.21
RAP1B-231	ENST00000544639	NAV1	Q8NEY1	1877 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	TMED7-TICAM2	A0A0A6YYA0	188 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	C5orf49	A4QMS7	147 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639		C9JCJ5	164 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	C1QC	P02747	245 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	IL6	P05231	212 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	HLA-DQB2	P05538	268 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNF705D	P0CH99	300 aa	Predicted RBP	1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNF705B	P0CI00	300 aa	Predicted RBP	1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	IFNGR2	P38484	337 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	UBE2G2	P60604	165 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	FKBP1A	P62942	108 aa	Known RBP	1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	MGAT3	Q09327	533 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	GPHB5	Q86YW7	130 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	OR8B12	Q8NGG6	310 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	C12orf43	Q96C57	262 aa	Known RBP	1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	NMNAT3	Q96T66	252 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	C7orf50	Q9BRJ6	194 aa	Known RBP	1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	TTTY13	Q9BZ97	58 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	EURL	Q9NYK6	297 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	LAMB2	P55268	1798 aa		1.21	□□□□□ -2.22
RAP1B-231	ENST00000544639	COL6A6	A6NMZ7	2263 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	DISP1	Q96F81	1524 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	PGLYRP1	O75594	196 aa	Predicted RBP	1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	OCM	P0CE72	109 aa	Predicted RBP	1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	FXYD7	P58549	80 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	TMEM258	P61165	79 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	MIA	Q16674	131 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	PLPPR5	Q32ZL2	321 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	OR51T1	Q8NGJ9	327 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	OR1L8	Q8NGR8	309 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNF675	Q8TD23	568 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	SMIM19	Q96E16	107 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	ZNF514	Q96K75	400 aa	Predicted RBP	1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	DERL2	Q9GZP9	239 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	WDR90	Q96KV7	1748 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	ABCC12	Q96J65	1359 aa		1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	BAZ2B	Q9UIF8	2168 aa	Known RBP	1.2	□□□□□ -2.22
RAP1B-231	ENST00000544639	LINC00854	A0A1B0GVQ3	168 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	BIRC5	O15392	142 aa		1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	ANG	P03950	147 aa	Known RBP	1.19	□□□□□ -2.22
RAP1B-231	ENST00000544639	UGT2B7	P16662	529 aa		1.19	□□□□□ -2.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms