RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SLC9A3R2Q15599 337 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 RPL39P5Q59GN2 51 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 TPTE2P1Q5T6R2 138 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 HCP5Q6MZN7 132 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 IL17RELQ6ZVW7 336 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 ZNF695Q8IW36 515 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 SPAG16Q8N0X2 631 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 ASB13Q8WXK3 278 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 RBPMSQ93062 196 aaKnown RBP7.71□□□□□ -1.18
YBX3-215ENST00000544504 MALSU1Q96EH3 234 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 TMEM56Q96MV1 263 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 ZNF251Q9BRH9 671 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 SEC22CQ9BRL7 303 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 RAB18Q9NP72 206 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 COMMD9Q9P000 198 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 TMEM56-RWDD3S4R434 201 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 WNK2Q9Y3S1 2297 aa7.71□□□□□ -1.18
YBX3-215ENST00000544504 CENPVL3A0A0U1RRI6 287 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 HMX3A6NHT5 357 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 LY6LH3BQJ8 138 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 PROP1O75360 226 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 CDS2O95674 445 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 HPRT1P00492 218 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 HRASP01112 189 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 ERVK-16P61578 105 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 KLRD1Q13241 179 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 SCGB2A2Q13296 93 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 UTF1Q5T230 341 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 PDPNQ86YL7 162 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 FAM219AQ8IW50 185 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 UXS1Q8NBZ7 420 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 OR5AN1Q8NGI8 311 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 OR52B4Q8NGK2 314 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 NANPQ8TBE9 248 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 GLYATL2Q8WU03 294 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 CHAC2Q8WUX2 184 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 RRNAD1Q96FB5 475 aaKnown RBP7.7□□□□□ -1.18
YBX3-215ENST00000544504 TP53RKQ96S44 253 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 SPIN2AQ99865 258 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 SPIN2BQ9BPZ2 258 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 NABP2Q9BQ15 211 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 PLEKHA2Q9HB19 425 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 SLC35D1Q9NTN3 355 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 CACFD1Q9UGQ2 172 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 WASHC3Q9Y3C0 194 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 TMED3Q9Y3Q3 217 aa7.7□□□□□ -1.18
YBX3-215ENST00000544504 ARHGAP32A7KAX9 2087 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 PRKDCP78527 4128 aaKnown RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 hCG_2014768A0A024R1R8 64 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 TRAV40A0A0B4J280 105 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 H7C2Y5 167 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 FCGR3BO75015 233 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 CT45A6P0DMU7 189 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 CT45A5P0DMU8 189 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 CT45A7P0DMV0 189 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 HLA-GP17693 338 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 VDAC1P21796 283 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 CD1BP29016 333 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 BRS3P32247 399 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 SAA4P35542 130 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 LPAR6P43657 344 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 RPL30P62888 115 aaKnown RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 CYCSP99999 105 aaKnown RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 SP6Q3SY56 376 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 TMEM268Q5VZI3 342 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 MOB3BQ86TA1 216 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 CADM3Q8N126 398 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 RNASE11Q8TAA1 199 aaKnown RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 OSR1Q8TAX0 266 aaPredicted RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 DDB2Q92466 427 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 C5orf30Q96GV9 206 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 RNF5Q99942 180 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 MRPL20Q9BYC9 149 aaKnown RBP7.69□□□□□ -1.18
YBX3-215ENST00000544504 FAM96BQ9Y3D0 163 aa7.69□□□□□ -1.18
YBX3-215ENST00000544504 IGHV1-3A0A0C4DH29 117 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 DBX1A6NMT0 343 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 FAM90A9PA6NNJ1 464 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 LINC00473A8K010 186 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 H0YJW9 148 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 FBP1P09467 338 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 SULT1A3P0DMM9 295 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 SULT1A4P0DMN0 295 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 NQO2P16083 231 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 LGALS7P47929 136 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 COMPP49747 757 aaPredicted RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 AKR1C2P52895 323 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 HABP2Q14520 560 aaPredicted RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 ANKRD55Q3KP44 614 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 TMEM177Q53S58 311 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 THOC7Q6I9Y2 204 aaKnown RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 GSG1LQ6UXU4 331 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 C3orf56Q8N813 242 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 ZNF383Q8NA42 475 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 DRAXINQ8NBI3 349 aaPredicted RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 OR4C13Q8NGP0 309 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 OR5M8Q8NGP6 311 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 LSM10Q969L4 123 aaKnown RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 FLYWCH2Q96CP2 140 aaKnown RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 TSNAXQ99598 290 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms