RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 OR4A5Q8NH83 315 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 MFSD8Q8NHS3 518 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 DTD1Q8TEA8 209 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 CACNG8Q8WXS5 425 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 GTF2H4Q92759 462 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 ZMYND19Q96E35 227 aaPredicted RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 TSSK6Q9BXA6 273 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 BCL2L14Q9BZR8 327 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 ALX4Q9H161 411 aaPredicted RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 ZNF286AQ9HBT8 521 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 CRCT1Q9UGL9 99 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 CCL26Q9Y258 94 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 USH1CQ9Y6N9 552 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 URGCP-MRPS24S4R325 110 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 GREB1Q4ZG55 1949 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 A0A1W2PP64 1363 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 ABCC12Q96J65 1359 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 LYSTQ99698 3801 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 EDC4Q6P2E9 1401 aaKnown RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 MED13Q9UHV7 2174 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 PTPRSQ13332 1948 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 TRAV8-2A0A0B4J237 113 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 A0A1W2PRG6 482 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 ARGFXA6NJG6 315 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 KNCNA6PVL3 124 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 SLC25A20O43772 301 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 CSTAP01040 98 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 IGKV5-2P06315 115 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 CCNOP22674 350 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 BLVRBP30043 206 aaPredicted RBP0.8□□□□□ -2.28
YBX3-214ENST00000544501 PYCR1P32322 319 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 VSNL1P62760 191 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 PRDX1Q06830 199 aaKnown RBP0.8□□□□□ -2.28
YBX3-214ENST00000544501 APOFQ13790 326 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 TRAM1Q15629 374 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 DGAT2L6Q6ZPD8 337 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 FAM183BPQ6ZVS7 135 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 SSX7Q7RTT5 188 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 TCF23Q7RTU1 214 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 PDCL2Q8N4E4 241 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 GATD1Q8NB37 220 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 OR4C16Q8NGL9 310 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 SPPL2BQ8TCT7 592 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 CD200R1Q8TD46 325 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 EBPLQ9BY08 206 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 TTTY12Q9BZ98 90 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 AICDAQ9GZX7 198 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 CXCL16Q9H2A7 254 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 KCNIP2Q9NS61 270 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 FSIP2Q5CZC0 6907 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 DYSFO75923 2080 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 SDK1Q7Z5N4 2213 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 DOCK2Q92608 1830 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 TANC1Q9C0D5 1861 aa0.8□□□□□ -2.28
YBX3-214ENST00000544501 MYO7AQ13402 2215 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 MGAT4DA6NG13 374 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 ODF3BA8MYP8 253 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 RNASEK-C17orf49H0YIS7 233 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 PLPP3O14495 311 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 CDIPTO14735 213 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 CRXO43186 299 aaPredicted RBP0.79□□□□□ -2.28
YBX3-214ENST00000544501 LTAP01374 205 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 ZNF3P17036 446 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 UGT2B10P36537 528 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 HSPA13P48723 471 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 FOXF1Q12946 379 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 OR8G1Q15617 311 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 TRIP13Q15645 432 aaPredicted RBP0.79□□□□□ -2.28
YBX3-214ENST00000544501 Q6ZRU5 148 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 Q6ZS52 159 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 Q6ZT83 130 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 ST13P4Q8IZP2 240 aaPredicted RBP0.79□□□□□ -2.28
YBX3-214ENST00000544501 OR2AE1Q8NHA4 323 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 RNASE11Q8TAA1 199 aaKnown RBP0.79□□□□□ -2.28
YBX3-214ENST00000544501 PDCD6IPQ8WUM4 868 aaKnown RBP0.79□□□□□ -2.28
YBX3-214ENST00000544501 DNAJC30Q96LL9 226 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 TXNDC17Q9BRA2 123 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 TMBIM4Q9HC24 238 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 TAS2R9Q9NYW1 312 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 BTRCQ9Y297 605 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 TBL2Q9Y4P3 447 aaKnown RBP0.79□□□□□ -2.28
YBX3-214ENST00000544501 ZNF236Q9UL36 1845 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 RFX7Q2KHR2 1363 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 FRAS1Q86XX4 4008 aa0.79□□□□□ -2.28
YBX3-214ENST00000544501 PTPRFP10586 1907 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 NUP205Q92621 2012 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 ATG2BQ96BY7 2078 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 LOC102725191A0A1B0GVB3 256 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 GOLGA8IPA6NC78 632 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 A8MWP6 167 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 FGF16O43320 207 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 SPNP16150 400 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 ZNF140P52738 457 aaPredicted RBP0.78□□□□□ -2.28
YBX3-214ENST00000544501 MP68P56378 58 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 CD164Q04900 197 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 PAFAH1B3Q15102 231 aaKnown RBP0.78□□□□□ -2.28
YBX3-214ENST00000544501 C18orf21Q32NC0 220 aaPredicted RBP0.78□□□□□ -2.28
YBX3-214ENST00000544501 MUC15Q8N387 334 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 DEFB124Q8NES8 71 aa0.78□□□□□ -2.28
YBX3-214ENST00000544501 OR5C1Q8NGR4 320 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms