RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KIAA1456Q9P272 454 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SHOXO15266 292 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 NBR2O15453 112 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CNTFRP26992 372 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 F2RL1P55085 397 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SURF2Q15527 256 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 KRTAP24-1Q3LI83 254 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TBC1D26Q86UD7 250 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CCDC71LQ8N9Z2 235 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 HARBI1Q96MB7 349 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 C7orf50Q9BRJ6 194 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 COPZ2Q9P299 210 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 JMJD1CQ15652 2540 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 FGF16O43320 207 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 UPK1BO75841 260 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PLGLAQ15195 96 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 ARSJQ5FYB0 599 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SPAG16Q8N0X2 631 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TMEM158Q8WZ71 300 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RNF5Q99942 180 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RASL11BQ9BPW5 248 aa11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 LIN7CQ9NUP9 197 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 LYRM1O43325 122 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CCR6P51684 374 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 BLCAPP62952 87 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RELBQ01201 579 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TMEM177Q53S58 311 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 C9orf152Q5JTZ5 239 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 C5orf56Q8N8D9 126 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 Q8N9W7 124 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PLSCR3Q9NRY6 295 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 GPR132Q9UNW8 380 aa11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SETD2Q9BYW2 2564 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-216ENST00000543995 MPPED1O15442 326 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 PLA2G10O15496 165 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RAMP3O60896 148 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 HKR1P10072 659 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 F2RP25116 425 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 LGALS7P47929 136 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RAG2P55895 527 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RND3P61587 244 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RBMS2Q15434 407 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 Q6ZSV7 163 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NPBQ8NG41 125 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OSR1Q8TAX0 266 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CD300LFQ8TDQ1 290 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SLC25A21Q9BQT8 299 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RTBDNQ9BSG5 229 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FBXL15Q9H469 300 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C5orf66Q9H5L9 145 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TEX13DA0A0J9YY54 714 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RRHO14718 337 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NDUFA3O95167 84 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 AMY1AP04745 511 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 BRWD1-AS2P59051 145 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TCTEX1D1Q8N7M0 179 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OR4F5Q8NH21 305 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C19orf24Q9BVV8 132 aa11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 METTL1Q9UBP6 276 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-216ENST00000543995 RBFOX2O43251 390 aaKnown RBP eCLIP11.5□□□□□ -0.572e-7■■■■□ 22.6
TNFRSF1A-216ENST00000543995 SLC25A17O43808 307 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TSPAN9O75954 239 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NDUFA7O95182 113 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SPDEFO95238 335 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 HPRT1P00492 218 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 HRASP01112 189 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 AKR1C4P17516 323 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 IFITM3Q01628 133 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 PSG5Q15238 335 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 VMA21Q3ZAQ7 101 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 LIN54Q6MZP7 749 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 Q6ZS46 218 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TMED4Q7Z7H5 227 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 NF1P21359 2839 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SRRM4A7MD48 611 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 IGLV2-23P01705 113 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 BTCP35070 178 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 LPAR6P43657 344 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 SSX9Q7RTT3 188 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 VKORC1L1Q8N0U8 176 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 ADAD2Q8NCV1 583 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 CLCC1Q96S66 551 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 AIFM2Q9BRQ8 373 aa11.5□□□□□ -0.57
TNFRSF1A-216ENST00000543995 TBC1D24Q9ULP9 559 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms