RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 CSMD2Q7Z408 3487 aa17.17■□□□□ 0.34
COMMD5-207ENST00000543949 PRRC2AP48634 2157 aaKnown RBP17.16■□□□□ 0.34
COMMD5-207ENST00000543949 MED13LQ71F56 2210 aa17.16■□□□□ 0.34
COMMD5-207ENST00000543949 MC5RP33032 325 aa17.16■□□□□ 0.34
COMMD5-207ENST00000543949 SRSF4Q08170 494 aaKnown RBP17.16■□□□□ 0.34
COMMD5-207ENST00000543949 LSM10Q969L4 123 aaKnown RBP17.16■□□□□ 0.34
COMMD5-207ENST00000543949 SEC22AQ96IW7 307 aa17.16■□□□□ 0.34
COMMD5-207ENST00000543949 IGHV1-3A0A0C4DH29 117 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 MPTX1A8MV57 137 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 OOSP1A8MZH6 123 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 H0YJW9 148 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 H7C2Y5 167 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 CRYZL1O95825 349 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 RAB13P51153 203 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 IAH1Q2TAA2 248 aaPredicted RBP17.15■□□□□ 0.34
COMMD5-207ENST00000543949 MIDNQ504T8 468 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 PDPNQ86YL7 162 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 OR8H3Q8N146 312 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 OR10C1Q96KK4 312 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 NMES1Q9C002 83 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 WASHC3Q9Y3C0 194 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 CENPVL3A0A0U1RRI6 287 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 ERVK-16P61578 105 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 NMSQ5H8A3 153 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 GPR157Q5UAW9 335 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 CYB5R2Q6BCY4 276 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 THOC7Q6I9Y2 204 aaKnown RBP17.15■□□□□ 0.34
COMMD5-207ENST00000543949 CCDC144NLQ6NUI1 221 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 LHFPL4Q7Z7J7 247 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 MOB3BQ86TA1 216 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 FAM219AQ8IW50 185 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 OR2T35Q8NGX2 323 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 R3HDM4Q96D70 268 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 RANBP3Q9H6Z4 567 aaPredicted RBP17.15■□□□□ 0.34
COMMD5-207ENST00000543949 HILPDAQ9Y5L2 63 aa17.15■□□□□ 0.34
COMMD5-207ENST00000543949 TRAV40A0A0B4J280 105 aa17.14■□□□□ 0.33
COMMD5-207ENST00000543949 NPFFO15130 113 aa17.14■□□□□ 0.33
COMMD5-207ENST00000543949 KRASP01116 189 aa17.14■□□□□ 0.33
COMMD5-207ENST00000543949 HNRNPCP07910 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
COMMD5-207ENST00000543949 G6PCP35575 357 aa17.14■□□□□ 0.33
COMMD5-207ENST00000543949 LDLRAD2Q5SZI1 272 aa17.14■□□□□ 0.33
COMMD5-207ENST00000543949 MMP24Q9Y5R2 645 aa17.14■□□□□ 0.33
COMMD5-207ENST00000543949 NBPF19A0A087WUL8 3843 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 UNC79Q9P2D8 2635 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 IGHV1-69DA0A0B4J2H0 117 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 MARCH11A6NNE9 402 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 HRASP01112 189 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 IGKV1-5P01602 117 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 IGHV1-69P01742 117 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 NQO2P16083 231 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 AIFM2Q9BRQ8 373 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 GSKIPQ9P0R6 139 aa17.13■□□□□ 0.33
COMMD5-207ENST00000543949 A0A1W2PPI3 338 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 SLC25A6P12236 298 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 SAA4P35542 130 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 H2BFWTQ7Z2G1 175 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 ZBTB8BQ8NAP8 495 aaPredicted RBP17.12■□□□□ 0.33
COMMD5-207ENST00000543949 DMBX1Q8NFW5 382 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 OSR1Q8TAX0 266 aaPredicted RBP17.12■□□□□ 0.33
COMMD5-207ENST00000543949 GPR146Q96CH1 333 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 FLYWCH2Q96CP2 140 aaKnown RBP17.12■□□□□ 0.33
COMMD5-207ENST00000543949 MALSU1Q96EH3 234 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 ITGB1BP2Q9UKP3 347 aa17.12■□□□□ 0.33
COMMD5-207ENST00000543949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.11■□□□□ 0.335e-6■■■■□ 22.8
COMMD5-207ENST00000543949 A0A1B0GU03 582 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 IGKV1-16P04430 117 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 ARHGDIBP52566 201 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 FGL1Q08830 312 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 SSX2Q16385 188 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 ZFP69Q49AA0 526 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 OR4C13Q8NGP0 309 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 WDR89Q96FK6 387 aaPredicted RBP17.11■□□□□ 0.33
COMMD5-207ENST00000543949 A0A0G2JRQ6 117 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 SHOXO15266 292 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 SMCO1Q147U7 214 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 TMEM177Q53S58 311 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 CIARTQ8N365 385 aaPredicted RBP17.11■□□□□ 0.33
COMMD5-207ENST00000543949 PPP1R1CQ8WVI7 109 aa17.11■□□□□ 0.33
COMMD5-207ENST00000543949 PDZD2O15018 2839 aa17.1■□□□□ 0.33
COMMD5-207ENST00000543949 IGHV3-72A0A0B4J1Y9 119 aa17.1■□□□□ 0.33
COMMD5-207ENST00000543949 TIMM23O14925 209 aa17.1■□□□□ 0.33
COMMD5-207ENST00000543949 SMAD7O15105 426 aaKnown RBP17.1■□□□□ 0.33
COMMD5-207ENST00000543949 C1QBP02746 253 aa17.1■□□□□ 0.33
COMMD5-207ENST00000543949 RHOVQ96L33 236 aa17.1■□□□□ 0.33
COMMD5-207ENST00000543949 HARBI1Q96MB7 349 aa17.1■□□□□ 0.33
COMMD5-207ENST00000543949 IGHV3OR16-10A0A075B7F0 116 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 SMLR1H3BR10 107 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 BOLA2-SMG1P6H3BVE0 249 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 CD1BP29016 333 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 POU2AF1Q16633 256 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 LRRC37A5PQ49AS3 106 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 SSX9Q7RTT3 188 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 PIP4P2Q8N4L2 257 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 OR1S1Q8NH92 325 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 MS4A7Q9GZW8 240 aaPredicted RBP17.09■□□□□ 0.33
COMMD5-207ENST00000543949 CACNG5Q9UF02 275 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 HECTD1Q9ULT8 2610 aa17.09■□□□□ 0.33
COMMD5-207ENST00000543949 P0C879 139 aa17.08■□□□□ 0.32
COMMD5-207ENST00000543949 IGHV4-38-2P0DP08 117 aa17.08■□□□□ 0.32
COMMD5-207ENST00000543949 RPS16P62249 146 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms