RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 TMEM56Q96MV1 263 aa11.06□□□□□ -0.64
TUBGCP2-210ENST00000543663 CCL13Q99616 98 aa11.06□□□□□ -0.64
TUBGCP2-210ENST00000543663 CXXC4Q9H2H0 198 aa11.06□□□□□ -0.64
TUBGCP2-210ENST00000543663 TRANK1O15050 2925 aa11.06□□□□□ -0.64
TUBGCP2-210ENST00000543663 C2orf16Q68DN1 1984 aa11.06□□□□□ -0.64
TUBGCP2-210ENST00000543663 LINC01387J3KSC0 135 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 TRA2AQ13595 282 aaKnown RBP eCLIP11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 GFRALQ6UXV0 394 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 OR10S1Q8NGN2 331 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 OR4X1Q8NH49 305 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 BOD1Q96IK1 185 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 PXMP4Q9Y6I8 212 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 SOD3P08294 240 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 SUCLG1P53597 346 aaKnown RBP11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 PARLQ9H300 379 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZNF581Q9P0T4 197 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 VMA21Q3ZAQ7 101 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 KHDC1LQ5JSQ8 128 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 RPEQ96AT9 228 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 RCC1LQ96I51 464 aaKnown RBP11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 SSBP3Q9BWW4 388 aaPredicted RBP11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZGRF1Q86YA3 2104 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 IGHV1-45A0A0A0MS14 117 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 FAM90A27PA6NNH2 459 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 B4DEV8 164 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 NKX2-8O15522 239 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 HOXA6P31267 233 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 PRDX2P32119 198 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 LRRC10Q5BKY1 277 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 FAM201AQ5SY85 155 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 ANGPTL4Q9BY76 406 aa11.05□□□□□ -0.64
TUBGCP2-210ENST00000543663 TNFRSF1AP19438 455 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 OR10J1P30954 320 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 ABLIM2Q6H8Q1 611 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 MANBALQ9NQG1 85 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 PCOLCEQ15113 449 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 IGKV1D-13A0A0B4J2D9 117 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 MKRN2OSH3BPM6 223 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 CD55P08174 381 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 IGKV1-13P0DP09 117 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 GZMHP20718 246 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 CBLN1P23435 193 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 HINT1P49773 126 aaPredicted RBP11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 SERF2P84101 59 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 TEPPQ6URK8 271 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 OR6C3Q9NZP0 311 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 GTF3C1Q12789 2109 aa11.04□□□□□ -0.64
TUBGCP2-210ENST00000543663 IGHV3-35A0A0C4DH35 117 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 LNP1A1A4G5 178 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZNF785A8K8V0 405 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 H0Y980 276 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 CYC1P08574 325 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 COL8A1P27658 744 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 FHL1Q13642 323 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 KRTCAP3Q53RY4 240 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 PRR31Q5SQ13 230 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 MARS2Q96GW9 593 aaKnown RBP11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 EAF1Q96JC9 268 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZDHHC8Q9ULC8 765 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 PIEZO1Q92508 2521 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 PGPEP1LA6NFU8 196 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 CCKARP32238 428 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 UCP2P55851 309 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 GFI1BQ5VTD9 330 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 S100A7AQ86SG5 101 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 DRAM1Q8N682 238 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 OR1P1Q8NH06 330 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 FGF11Q92914 225 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZPBPQ9BS86 351 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 NAGKQ9UJ70 344 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 CLPSP04118 112 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 SP1P08047 785 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 IGFBP3P17936 291 aaPredicted RBP11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 TRIP6Q15654 476 aaKnown RBP11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 OR51G1Q8NGK1 321 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 FAM222BQ8WU58 562 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 M0R296 226 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 SLC17A3O00476 420 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
TUBGCP2-210ENST00000543663 hADV38S2A0JD32 116 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 RRHO14718 337 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 S100A4P26447 101 aaKnown RBP11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 FOXG1P55316 489 aaPredicted RBP11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 SPCS3P61009 180 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 PRB3Q04118 309 aaPredicted RBP11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 ZNF600Q6ZNG1 722 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 PQLC2Q6ZP29 291 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 PDPNQ86YL7 162 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 OPN3Q9H1Y3 402 aaPredicted RBP11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 CBY1Q9Y3M2 126 aa11.02□□□□□ -0.64
TUBGCP2-210ENST00000543663 PTPRSQ13332 1948 aa11.02□□□□□ -0.65
TUBGCP2-210ENST00000543663 LOC389332A0A1B0GUA5 103 aa11.02□□□□□ -0.65
TUBGCP2-210ENST00000543663 REG1AP05451 166 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms