RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SELLP14151 372 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 TDGF1P3P51864 188 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 ATP6V1FQ16864 119 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 NCOR1P1Q9H4R4 102 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 TIMM9Q9Y5J7 89 aa11.53□□□□□ -0.56
MSH2-206ENST00000543555 PRRG2O14669 202 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 FCGR3BO75015 233 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 FBP1P09467 338 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 CGB3P0DN86 165 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 CGB7P0DN87 165 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 LCN15Q6UWW0 184 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 SSX7Q7RTT5 188 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 MRGPRGQ86SM5 289 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 ZNF561Q8N587 486 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 Q8NA96 180 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 ISOC2Q96AB3 205 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 TMEM147Q9BVK8 224 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 GNG13Q9P2W3 67 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 PRELID1Q9Y255 219 aa11.52□□□□□ -0.56
MSH2-206ENST00000543555 CACNA1DQ01668 2161 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 A0A0G2JNJ9 132 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 M0R1X1 148 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 HPRT1P00492 218 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 ZNF134P52741 427 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 CEBPGP53567 150 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 Q9UFV3 132 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
MSH2-206ENST00000543555 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 H3BQ15 152 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 IGHV3-7P01780 117 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 MT-ND4LP03901 98 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 ELLP55199 621 aaPredicted RBP11.52□□□□□ -0.57
MSH2-206ENST00000543555 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 RPL39P5Q59GN2 51 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 STUMQ69YW2 141 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 CENPVQ7Z7K6 275 aaPredicted RBP11.52□□□□□ -0.57
MSH2-206ENST00000543555 NUP37Q8NFH4 326 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 OR10P1Q8NGE3 313 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 SDSLQ96GA7 329 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.57
MSH2-206ENST00000543555 DIDO1Q9BTC0 2240 aaKnown RBP11.51□□□□□ -0.57
MSH2-206ENST00000543555 A0A1W2PPH5 198 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 NDUFA2O43678 99 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 SPINK9Q5DT21 86 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
MSH2-206ENST00000543555 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 A0A1W2PPE2 198 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 RBFOX2O43251 390 aaKnown RBP eCLIP11.51□□□□□ -0.57
MSH2-206ENST00000543555 CYB5R3P00387 301 aaPredicted RBP11.51□□□□□ -0.57
MSH2-206ENST00000543555 TNFSF4P23510 183 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
MSH2-206ENST00000543555 OR10G4Q8NGN3 311 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 FAM234AQ9H0X4 552 aa11.51□□□□□ -0.57
MSH2-206ENST00000543555 CADP27708 2225 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 FAM90A9PA6NNJ1 464 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 ITGB1BP1O14713 200 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 SLC31A2O15432 143 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 ARG1P05089 322 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 BCL2P10415 239 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
MSH2-206ENST00000543555 OR2B8PP59922 312 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 RNF212Q495C1 297 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 TMEM108Q6UXF1 575 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 Q8TCH9 128 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 RAB39BQ96DA2 213 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
MSH2-206ENST00000543555 RAB9BQ9NP90 201 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 CISD1Q9NZ45 108 aaKnown RBP11.5□□□□□ -0.57
MSH2-206ENST00000543555 ZFP92A6NM28 416 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 C16orf97H3BN30 126 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 RPS16P62249 146 aaKnown RBP11.5□□□□□ -0.57
MSH2-206ENST00000543555 BIN3Q9NQY0 253 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 ELOVL5Q9NYP7 299 aa11.5□□□□□ -0.57
MSH2-206ENST00000543555 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 MAP1LC3B2A6NCE7 125 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 IGKV1D-33P01593 117 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 IGKV1-33P01594 117 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 RAB7AP51149 207 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 HABP2Q14520 560 aaPredicted RBP11.49□□□□□ -0.57
MSH2-206ENST00000543555 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 UTF1Q5T230 341 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 PRAMEF5Q5TYX0 476 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 C2CD4CQ8TF44 421 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 GAFA1Q96PS6 74 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 MAP1LC3BQ9GZQ8 125 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 KLF2Q9Y5W3 355 aaPredicted RBP11.49□□□□□ -0.57
MSH2-206ENST00000543555 FGF7P21781 194 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 PTAFRP25105 342 aa11.49□□□□□ -0.57
MSH2-206ENST00000543555 RAB5BP61020 215 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms