RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 KBTBD11O94819 623 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 TRGC2P03986 189 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 GZMHP20718 246 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 GPR12P47775 334 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 CD81P60033 236 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 P2RY6Q15077 328 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
PPME1-208ENST00000543525 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 CYP2G1PQ6ZSU1 146 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 BHLHA15Q7RTS1 189 aaPredicted RBP11.24□□□□□ -0.61
PPME1-208ENST00000543525 FAM90A1Q86YD7 464 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 TPRX1Q8N7U7 411 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 FAM169BQ8N8A8 192 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 MIOXQ9UGB7 285 aa11.24□□□□□ -0.61
PPME1-208ENST00000543525 ZFYVE26Q68DK2 2539 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 FRYQ5TBA9 3013 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 DEFB108AA8MXU0 73 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
PPME1-208ENST00000543525 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
PPME1-208ENST00000543525 TFF3Q07654 80 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 FOXF2Q12947 444 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 ADIRFQ15847 76 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
PPME1-208ENST00000543525 NPCDR1Q9BY65 106 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 ZNF71Q9NQZ8 489 aaPredicted RBP11.23□□□□□ -0.61
PPME1-208ENST00000543525 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
PPME1-208ENST00000543525 CEP295Q9C0D2 2601 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 WISP2O76076 250 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 EDDM3AQ14507 147 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 HNF4GQ14541 408 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 PIP4P1Q86T03 277 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 JPT1Q9UK76 154 aa11.23□□□□□ -0.61
PPME1-208ENST00000543525 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 SOX15O60248 233 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 HPRT1P00492 218 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 MDKP21741 143 aaPredicted RBP11.22□□□□□ -0.61
PPME1-208ENST00000543525 DUTP33316 252 aaKnown RBP11.22□□□□□ -0.61
PPME1-208ENST00000543525 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
PPME1-208ENST00000543525 BSXQ3C1V8 233 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 SPNS3Q6ZMD2 512 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 RAB24Q969Q5 203 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 SNX22Q96L94 193 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 GGACTQ9BVM4 153 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 QTRT1Q9BXR0 403 aaKnown RBP11.22□□□□□ -0.61
PPME1-208ENST00000543525 OPN3Q9H1Y3 402 aaPredicted RBP11.22□□□□□ -0.61
PPME1-208ENST00000543525 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 KNTC1P50748 2209 aa11.22□□□□□ -0.61
PPME1-208ENST00000543525 SRRM5B3KS81 715 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 MGST3O14880 152 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 HMGB3O15347 200 aaKnown RBP11.21□□□□□ -0.61
PPME1-208ENST00000543525 YPEL1O60688 119 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 RPS16P62249 146 aaKnown RBP11.21□□□□□ -0.61
PPME1-208ENST00000543525 LTC4SQ16873 150 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 AARDQ4LEZ3 155 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 SPINK9Q5DT21 86 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 OR4F5Q8NH21 305 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
PPME1-208ENST00000543525 STARD4Q96DR4 205 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 YPEL2Q96QA6 119 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 OR4F4Q96R69 305 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 ZZEF1O43149 2961 aa11.21□□□□□ -0.61
PPME1-208ENST00000543525 SMCO3A2RU48 225 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 IFITM10A6NMD0 228 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 C15orf62A8K5M9 175 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 FCGR3BO75015 233 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 TNFSF13O75888 250 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 CGAP01215 116 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 OR9G9P0C7N8 305 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 EGR1P18146 543 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 KIR2DS2P43631 304 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 SPCS3P61009 180 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 FOXC1Q12948 553 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 MORN2Q502X0 79 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 PRAMEF5Q5TYX0 476 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 OR4A16Q8NH70 328 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 FRZBQ92765 325 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 NEIL1Q96FI4 390 aaPredicted RBP11.21□□□□□ -0.62
PPME1-208ENST00000543525 DIRC2Q96SL1 478 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 SLC25A15Q9Y619 301 aa11.21□□□□□ -0.62
PPME1-208ENST00000543525 CNOT1A5YKK6 2376 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms