RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 TRAPPC2BP0DI82 140 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 SULT1A3P0DMM9 295 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 SULT1A4P0DMN0 295 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 RAB13P51153 203 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 ARHGDIBP52566 201 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 KLF17Q5JT82 389 aaPredicted RBP8.62□□□□□ -1.03
DDB1-221ENST00000543162 BRD3OSQ6XYD6 125 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 LYZL2Q7Z4W2 148 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 SLC35G3Q8N808 338 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 OR11H7Q8NGC8 314 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 RNASE11Q8TAA1 199 aaKnown RBP8.62□□□□□ -1.03
DDB1-221ENST00000543162 CHAC2Q8WUX2 184 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 C17orf50Q8WW18 174 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 C18orf12Q96KH6 178 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 WASHC3Q9Y3C0 194 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 CSPG4Q6UVK1 2322 aa8.62□□□□□ -1.03
DDB1-221ENST00000543162 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 C13orf42A0A1B0GVH6 325 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 FAM25EA8MYX2 175 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 CCSO14618 274 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 TIMM23O14925 209 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 CD5LO43866 347 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 HPRT1P00492 218 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 IGKV1-39P01597 117 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 IGKV1D-39P04432 117 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 HLA-GP17693 338 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 CXCL3P19876 107 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 AKR1C2P52895 323 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 BPIFB3P59826 476 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 ERVK-16P61578 105 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 GGNBP1Q5YKI7 109 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 DYNAPQ8N1N2 210 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 TEX29Q8N6K0 151 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 NANPQ8TBE9 248 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 FLYWCH2Q96CP2 140 aaKnown RBP8.61□□□□□ -1.03
DDB1-221ENST00000543162 RRNAD1Q96FB5 475 aaKnown RBP8.61□□□□□ -1.03
DDB1-221ENST00000543162 AJUBAQ96IF1 538 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 COMMD9Q9P000 198 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 FAM96BQ9Y3D0 163 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 TMED3Q9Y3Q3 217 aa8.61□□□□□ -1.03
DDB1-221ENST00000543162 ZANQ9Y493 2812 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 A0A0U1RQK1 487 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 SHOXO15266 292 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 SIX6O95475 246 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 HRASP01112 189 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 KRASP01116 189 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 FSHBP01225 129 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 NQO2P16083 231 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 VDAC1P21796 283 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 PAX6P26367 422 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 CD1BP29016 333 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 G6PCP35575 357 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 KRTAP1-1Q07627 177 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 SPNS3Q6ZMD2 512 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 AKAP14Q86UN6 197 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 OR4C13Q8NGP0 309 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 OR5M8Q8NGP6 311 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 OSR1Q8TAX0 266 aaPredicted RBP8.6□□□□□ -1.03
DDB1-221ENST00000543162 CFHR4Q92496 578 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 R3HDM4Q96D70 268 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 AIFM2Q9BRQ8 373 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 PDCD10Q9BUL8 212 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 CHIAQ9BZP6 476 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 ZNF436Q9C0F3 470 aaPredicted RBP8.6□□□□□ -1.03
DDB1-221ENST00000543162 MS4A7Q9GZW8 240 aaPredicted RBP8.6□□□□□ -1.03
DDB1-221ENST00000543162 YAE1D1Q9NRH1 226 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 NUP50Q9UKX7 468 aa8.6□□□□□ -1.03
DDB1-221ENST00000543162 ACANP16112 2415 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 MARCH11A6NNE9 402 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 PFDN1O60925 122 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 CCNKO75909 580 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 VENTXO95231 258 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 IGKV1-5P01602 117 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 BRS3P32247 399 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 H2BFSP57053 126 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 RPS16P62249 146 aaKnown RBP8.59□□□□□ -1.03
DDB1-221ENST00000543162 CD83Q01151 205 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 HABP2Q14520 560 aaPredicted RBP8.59□□□□□ -1.03
DDB1-221ENST00000543162 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 THOC7Q6I9Y2 204 aaKnown RBP8.59□□□□□ -1.03
DDB1-221ENST00000543162 H2BFWTQ7Z2G1 175 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 FAM219AQ8IW50 185 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 DMBX1Q8NFW5 382 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 LSM10Q969L4 123 aaKnown RBP8.59□□□□□ -1.03
DDB1-221ENST00000543162 RBMXL1Q96E39 390 aaKnown RBP8.59□□□□□ -1.03
DDB1-221ENST00000543162 SEC22AQ96IW7 307 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 RHOVQ96L33 236 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 HARBI1Q96MB7 349 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 SPIN2AQ99865 258 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 SPIN2BQ9BPZ2 258 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 MMP24Q9Y5R2 645 aa8.59□□□□□ -1.03
DDB1-221ENST00000543162 TLN2Q9Y4G6 2542 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 TEX15Q9BXT5 2789 aa8.58□□□□□ -1.04
DDB1-221ENST00000543162 CSMD1Q96PZ7 3565 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms