RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 LILRB2Q8N423 598 aa14.32□□□□□ -0.12
SPIDR-227ENST00000541342 TAF15Q92804 592 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPIDR-227ENST00000541342 OR2H2O95918 312 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 ZNF16P17020 682 aaPredicted RBP14.31□□□□□ -0.12
SPIDR-227ENST00000541342 HNF4GQ14541 408 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 PRAMEF6Q5VXH4 476 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 OR4X1Q8NH49 305 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 PARD6GQ9BYG4 376 aaPredicted RBP14.31□□□□□ -0.12
SPIDR-227ENST00000541342 CXXC4Q9H2H0 198 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 A0A1B0GWJ7 208 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 NXPH2O95156 264 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 OPN1MWP04001 364 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 OPN1MW2P0DN77 364 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 OPN1MW3P0DN78 364 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 HBG1P69891 147 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 HBG2P69892 147 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 DEFA6Q01524 100 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 DRAM1Q8N682 238 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 PACRGQ96M98 296 aaPredicted RBP14.31□□□□□ -0.12
SPIDR-227ENST00000541342 HES4Q9HCC6 221 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 GFOD1Q9NXC2 390 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 RELNP78509 3460 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 KALRNO60229 2985 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 SIRPB1O00241 398 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 WNT9BO14905 357 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 ZNF737O75373 536 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 ZNF146Q15072 292 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 ACSM6Q6P461 480 aa14.31□□□□□ -0.12
SPIDR-227ENST00000541342 PFN1P07737 140 aaKnown RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 PMS2P11Q13670 270 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 C3orf36Q3SXR2 165 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 TMEM14EPQ6UXP3 125 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 C1orf174Q8IYL3 243 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 AGMATQ9BSE5 352 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 RAMP3O60896 148 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 DNLZQ5SXM8 178 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 FAM53AQ6NSI3 398 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 FGFRL1Q8N441 504 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 C5orf30Q96GV9 206 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 LIN7CQ9NUP9 197 aaKnown RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 HMGB3O15347 200 aaKnown RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 GZMHP20718 246 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 CEBPDP49716 269 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 MEF2BQ02080 365 aaPredicted RBP14.3□□□□□ -0.12
SPIDR-227ENST00000541342 SLC38A11Q08AI6 406 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 CTDSP1Q9GZU7 261 aa14.3□□□□□ -0.12
SPIDR-227ENST00000541342 OR8G2PQ6IF36 304 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 WDR82Q6UXN9 313 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 CYP2G1PQ6ZSU1 146 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 C16orf82Q7Z2V1 217 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 GATAD1Q8WUU5 269 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 SMIM7Q9BQ49 75 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 PYGO2Q9BRQ0 406 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 UFSP2Q9NUQ7 469 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 DUSP13Q9UII6 198 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 PIGBOS1A0A0B4J2F0 54 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 C1QTNF9BB2RNN3 333 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 CRYAAP02489 173 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 IL2RGP31785 369 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 ADIRFQ15847 76 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 OR10A7Q8NGE5 316 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 LHX4Q969G2 390 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
SPIDR-227ENST00000541342 MBNL3Q9NUK0 354 aaKnown RBP14.29□□□□□ -0.12
SPIDR-227ENST00000541342 CACNA1DQ01668 2161 aa14.29□□□□□ -0.12
SPIDR-227ENST00000541342 CENPVQ7Z7K6 275 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-227ENST00000541342 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 PITPNC1Q9UKF7 332 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 PCNX1Q96RV3 2341 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 P0C879 139 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 CEACAM6P40199 344 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 UCNP55089 124 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 COL10A1Q03692 680 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 TNFRSF9Q07011 255 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 TRAPPC2LQ9UL33 140 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 TGOLN2O43493 480 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 PAX1P15863 534 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 RPL23P62829 140 aaKnown RBP14.28□□□□□ -0.12
SPIDR-227ENST00000541342 NCR3LG1Q68D85 454 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 VHLLQ6RSH7 139 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 MOB1BQ7L9L4 216 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 NECAP1Q8NC96 275 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 OR51G1Q8NGK1 321 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 ELOVL1Q9BW60 279 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 PRO1933Q9H354 126 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 SRD5A3Q9H8P0 318 aa14.28□□□□□ -0.12
SPIDR-227ENST00000541342 KBTBD11O94819 623 aa14.27□□□□□ -0.12
SPIDR-227ENST00000541342 GLRXP35754 106 aa14.27□□□□□ -0.12
SPIDR-227ENST00000541342 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.12
SPIDR-227ENST00000541342 OR2Z1Q8NG97 314 aa14.27□□□□□ -0.12
SPIDR-227ENST00000541342 SLC25A22Q9H936 323 aa14.27□□□□□ -0.12
SPIDR-227ENST00000541342 JKAMPQ9P055 326 aa14.27□□□□□ -0.12
SPIDR-227ENST00000541342 HAND1O96004 215 aa14.27□□□□□ -0.13
SPIDR-227ENST00000541342 TFF1P04155 84 aa14.27□□□□□ -0.13
SPIDR-227ENST00000541342 BRWD1-AS2P59051 145 aa14.27□□□□□ -0.13
SPIDR-227ENST00000541342 SPRNQ5BIV9 151 aa14.27□□□□□ -0.13
SPIDR-227ENST00000541342 SLC39A9Q9NUM3 307 aa14.27□□□□□ -0.13
SPIDR-227ENST00000541342 HSPB7Q9UBY9 170 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms