RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TRAV41A0A0B4J266 112 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CCDC160A6NGH7 325 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 SRRM4A7MD48 611 aaKnown RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 G3V318 75 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CTDSP2O14595 271 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 TNFSF12O43508 249 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 FCGR3BO75015 233 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CA2P00918 260 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 IGLV2-23P01705 113 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 IGHG4P01861 327 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 NAT1P18440 290 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 HRH1P35367 487 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 TAS2R46P59540 309 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 HERV-K104P61576 105 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 RPL23AP62750 156 aaKnown RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 GNB1P62873 340 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 RPL30P62888 115 aaKnown RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CFHR3Q02985 330 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 FOXE3Q13461 319 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 DYRK1AQ13627 763 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 ECSCRQ19T08 205 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 TMEM177Q53S58 311 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CXorf66Q5JRM2 361 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF660Q6AZW8 331 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF562Q6V9R5 426 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 LCNL1Q6ZST4 164 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 OVCH2Q7RTZ1 564 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 TMEM17Q86X19 198 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 LYSMD2Q8IV50 215 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 LAX1Q8IWV1 398 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 TCTEX1D2Q8WW35 142 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 HSD17B10Q99714 261 aaKnown RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 MIXL1Q9H2W2 232 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CCL28Q9NRJ3 127 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CCDC59Q9P031 241 aaKnown RBP7.24□□□□□ -1.25
SNHG1-215ENST00000540904 ADAM30Q9UKF2 790 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 CEPT1Q9Y6K0 416 aa7.24□□□□□ -1.25
SNHG1-215ENST00000540904 SULT1C2O00338 296 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 CNIH1O95406 144 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 PF4P02776 101 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 RCVRNP35243 200 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 PJVKQ0ZLH3 352 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-215ENST00000540904 FXYD3Q14802 87 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 VMA21Q3ZAQ7 101 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 TMEM65Q6PI78 240 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 DHRS11Q6UWP2 260 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF66Q6ZN08 573 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 IDO2Q6ZQW0 420 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 C18orf65Q6ZTR6 163 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 PPP1R27Q86WC6 154 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 MFSD4AQ8N468 514 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 KLHL30-AS1Q8NEE0 82 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 OR6F1Q8NGZ6 308 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 OR52I2Q8NH67 350 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 GRPEL2Q8TAA5 225 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 ABHD1Q96SE0 405 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF2Q9BSG1 426 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-215ENST00000540904 FAM103A1Q9BTL3 118 aaKnown RBP7.23□□□□□ -1.25
SNHG1-215ENST00000540904 C6orf62Q9GZU0 229 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-215ENST00000540904 ZFP57Q9NU63 452 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 KLK11Q9UBX7 282 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF580Q9UK33 172 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 FBXO7Q9Y3I1 522 aa7.23□□□□□ -1.25
SNHG1-215ENST00000540904 A0A1W2PN81 502 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 M0QYG6 137 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 WIPF1O43516 503 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 CRYGBP07316 175 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 ELANEP08246 267 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 EGR2P11161 476 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-215ENST00000540904 PSMB8P28062 276 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
SNHG1-215ENST00000540904 GNRHRP30968 328 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 CHRNA7P36544 502 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 UBE2KP61086 200 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 TSPAN5P62079 268 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 TMEM267Q0VDI3 215 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-215ENST00000540904 MSMO1Q15800 293 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF818PQ6ZRF7 136 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 C8orf86Q6ZUL3 223 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 C1QL4Q86Z23 238 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF695Q8IW36 515 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 VKORC1L1Q8N0U8 176 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 ZBTB34Q8NCN2 500 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 OR4S2Q8NH73 311 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 OSR1Q8TAX0 266 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-215ENST00000540904 C15orf40Q8WUR7 153 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 FCAMRQ8WWV6 532 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 ARPC1AQ92747 370 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 MOB3AQ96BX8 217 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 DIRAS2Q96HU8 199 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 SLIRPQ9GZT3 109 aaKnown RBP7.22□□□□□ -1.25
SNHG1-215ENST00000540904 KLK15Q9H2R5 256 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 FOXA2Q9Y261 457 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-215ENST00000540904 MGAM2Q2M2H8 2515 aa7.22□□□□□ -1.25
SNHG1-215ENST00000540904 ARPC1BO15143 372 aaKnown RBP7.21□□□□□ -1.26
SNHG1-215ENST00000540904 SOX15O60248 233 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 RAMP3O60896 148 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms