RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
CD9-209ENST00000540891 RAB2BQ8WUD1 216 aa13.2□□□□□ -0.3
CD9-209ENST00000540891 GIMAP1Q8WWP7 306 aa13.2□□□□□ -0.3
CD9-209ENST00000540891 GPHA2Q96T91 129 aa13.2□□□□□ -0.3
CD9-209ENST00000540891 FAM103A1Q9BTL3 118 aaKnown RBP13.2□□□□□ -0.3
CD9-209ENST00000540891 CCL28Q9NRJ3 127 aa13.2□□□□□ -0.3
CD9-209ENST00000540891 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
CD9-209ENST00000540891 SMIM31A0A1B0GVY4 71 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
CD9-209ENST00000540891 SHOXO15266 292 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 SOX15O60248 233 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 CRYZL1O95825 349 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 RFX2P48378 723 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 BRWD1-AS2P59051 145 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 PJVKQ0ZLH3 352 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 KIAA0141Q14154 515 aaPredicted RBP13.19□□□□□ -0.3
CD9-209ENST00000540891 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
CD9-209ENST00000540891 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 PPP1R27Q86WC6 154 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 LYSMD2Q8IV50 215 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 KLHL30-AS1Q8NEE0 82 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 SECTM1Q8WVN6 248 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 BCL7BQ9BQE9 202 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 KLK15Q9H2R5 256 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 MIXL1Q9H2W2 232 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 EHFQ9NZC4 300 aa13.19□□□□□ -0.3
CD9-209ENST00000540891 FAM25AB3EWG3 89 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 FAM25CB3EWG5 89 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 FAM25GB3EWG6 89 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 FCGR3BO75015 233 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 PMP2P02689 132 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 DEFA6Q01524 100 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 DYRK1AQ13627 763 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 MSMO1Q15800 293 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 OR2B11Q5JQS5 317 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 ZNF695Q8IW36 515 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 DYNC2LI1Q8TCX1 351 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 HSD17B10Q99714 261 aaKnown RBP13.18□□□□□ -0.3
CD9-209ENST00000540891 SCPEP1Q9HB40 452 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
CD9-209ENST00000540891 A0A1W2PN81 502 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 NUDT19A8MXV4 375 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 TNFSF12O43508 249 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 PF4P02776 101 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 SLC6A1P30531 599 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 CHRNA7P36544 502 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
CD9-209ENST00000540891 FXYD4P59646 89 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 UBE2KP61086 200 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 CBX3Q13185 183 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 FXYD3Q14802 87 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 OXLD1Q5BKU9 147 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 DHRS11Q6UWP2 260 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 ZNF66Q6ZN08 573 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 MFSD4AQ8N468 514 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 LINC00482Q8N8I6 264 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 OSR1Q8TAX0 266 aaPredicted RBP13.17□□□□□ -0.3
CD9-209ENST00000540891 ARPC1AQ92747 370 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 P2RX4Q99571 388 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 SLC5A7Q9GZV3 580 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 EXTL2Q9UBQ6 330 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 A3GALT2U3KPV4 340 aa13.17□□□□□ -0.3
CD9-209ENST00000540891 H3BMQ9 156 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 SULT1C2O00338 296 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 CTDSP2O14595 271 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 HRH1P35367 487 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 TAS2R46P59540 309 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
CD9-209ENST00000540891 ZNF818PQ6ZRF7 136 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
CD9-209ENST00000540891 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 LFNGQ8NES3 379 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 OR5H2Q8NGV7 314 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 TCTEX1D2Q8WW35 142 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 MOB3AQ96BX8 217 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 ISOC1Q96CN7 298 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 RAX2Q96IS3 184 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 ABHD1Q96SE0 405 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 ZNF2Q9BSG1 426 aaPredicted RBP13.16□□□□□ -0.3
CD9-209ENST00000540891 PRELID3BQ9Y3B1 194 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
CD9-209ENST00000540891 SAA1P0DJI8 122 aaPredicted RBP13.15□□□□□ -0.3
CD9-209ENST00000540891 CD33P20138 364 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 GNRHRP30968 328 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 MYCNOSP40205 109 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 RAB9AP51151 201 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 VMA21Q3ZAQ7 101 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 TMEM17Q86X19 198 aa13.15□□□□□ -0.3
CD9-209ENST00000540891 LAX1Q8IWV1 398 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms