RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FER1L5	A0AVI2	2057 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	VPS13A	Q96RL7	3174 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		M0R143	59 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CRYGS	P22914	178 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CD40	P25942	277 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GLRX	P35754	106 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RPL23	P62829	140 aa	Known RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GABRA6	Q16445	453 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TDRG1	Q3Y452	100 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DNLZ	Q5SXM8	178 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZDHHC23	Q8IYP9	409 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF611	Q8N823	705 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR51G1	Q8NGK1	321 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR4F5	Q8NH21	305 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FGFBP3	Q8TAT2	258 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SPSB1	Q96BD6	273 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR4F4	Q96R69	305 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SLC39A9	Q9NUM3	307 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CACNG5	Q9UF02	275 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FAM215A	Q9Y5M1	114 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	UNC79	Q9P2D8	2635 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783		A0A0U1RQK1	487 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PGLYRP1	O75594	196 aa	Predicted RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGKV1D-33	P01593	117 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGKV1-33	P01594	117 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SERPINE2	P07093	398 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGHV1-2	P23083	117 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MDH2	P40926	338 aa	Known RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	UQCRFS1	P47985	274 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RBM11	P57052	281 aa	Known RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SRPX	P78539	464 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	BAX	Q07812	192 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DAZAP2	Q15038	168 aa	Predicted RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF573	Q86YE8	665 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	BEND2	Q8NDZ0	799 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM18	Q96B42	140 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SDSL	Q96GA7	329 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR4C12	Q96R67	309 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FKBP11	Q9NYL4	201 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PSENEN	Q9NZ42	101 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NAT8	Q9UHE5	227 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	DOCK11	Q5JSL3	2073 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IGKV1-6	A0A0C4DH72	117 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	UBE2L5P	A0A1B0GUS4	154 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HS3ST1	O14792	307 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	SYNGR3	O43761	229 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GCG	P01275	180 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CCL2	P13500	99 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RAC2	P15153	192 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	BCL3	P20749	454 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	NTF4	P34130	210 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PDLIM4	P50479	330 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ATP5J2	P56134	94 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	HAPLN4	Q86UW8	402 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF488	Q96MN9	340 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM208	Q9BTX3	173 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TMEM242	Q9NWH2	141 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CRIM1	Q9NZV1	1036 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PPP1R3C	Q9UQK1	317 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MPC1	Q9Y5U8	109 aa		4.77	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ABCA12	Q86UK0	2595 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PTPN13	Q12923	2485 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PGPEP1L	A6NFU8	196 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TRAPPC2L	H3BP13	241 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	S100G	P29377	79 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OTX1	P32242	354 aa	Predicted RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TNFAIP6	P98066	277 aa	Predicted RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FAM78B	Q5VT40	261 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	LHFPL2	Q6ZUX7	228 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RPP25L	Q8N5L8	163 aa	Known RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ZNF525	Q8N782	197 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MRPL30	Q8TCC3	161 aa	Known RBP	4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RDH5	Q92781	318 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	PARL	Q9H300	379 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CACNA1D	Q01668	2161 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FRY	Q5TBA9	3013 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TRAV1-1	A0A0B4J248	108 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GRIFIN	A4D1Z8	144 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TGOLN2	O43493	480 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	UCP1	P25874	307 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CEACAM6	P40199	344 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	ERVFC1-1	P60608	527 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	RAB4B	P61018	213 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	FOXF2	Q12947	444 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	IQCJ	Q1A5X6	159 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TCF23	Q7RTU1	214 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MUC15	Q8N387	334 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR10V1	Q8NGI7	309 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR10G4	Q8NGN3	311 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR2T10	Q8NGZ9	312 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	TBX15	Q96SF7	602 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	CTDSP1	Q9GZU7	261 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	OR51I2	Q9H344	312 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	MSL2	Q9HCI7	577 aa		4.76	□□□□□ -1.65
RAPGEF4-215	ENST00000540783	GOLT1B	Q9Y3E0	138 aa		4.76	□□□□□ -1.65

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