RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 WBP1Q96G27 269 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 SLC31A2O15432 143 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 SCGB1D1O95968 90 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 CXorf1O96002 111 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 IGKV1D-33P01593 117 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 IGKV1-33P01594 117 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 FAM209BQ5JX69 171 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 FA2HQ7L5A8 372 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 BPIFA4PQ86YQ2 179 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 OPN4Q9UHM6 478 aa12.04□□□□□ -0.48
COLCA1-204ENST00000540738 RHBDL1O75783 438 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 TSPOP30536 169 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 MBNL2Q5VZF2 373 aaKnown RBP12.03□□□□□ -0.48
COLCA1-204ENST00000540738 PRR13Q9NZ81 148 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
COLCA1-204ENST00000540738 OR10J1P30954 320 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 CD200R1LQ6Q8B3 271 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 ADAD2Q8NCV1 583 aaKnown RBP12.03□□□□□ -0.48
COLCA1-204ENST00000540738 V9GYH0 126 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 TICRRQ7Z2Z1 1910 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 HELTA6NFD8 242 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 H0YL77 283 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 RND2P52198 227 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 SNRPD3P62318 126 aaKnown RBP12.03□□□□□ -0.48
COLCA1-204ENST00000540738 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 C12orf77C9JDV5 145 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 OR2J3O76001 311 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 IGHV1-46P01743 117 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 PAXXQ9BUH6 204 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 RALGAPA1Q6GYQ0 2036 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 J3KRW8 73 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF146Q15072 292 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 C5orf17Q8NAS9 161 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 RTN4RQ9BZR6 473 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
COLCA1-204ENST00000540738 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
COLCA1-204ENST00000540738 ZNF735P0CB33 412 aa12.02□□□□□ -0.48
COLCA1-204ENST00000540738 UCP3P55916 312 aa12.02□□□□□ -0.48
COLCA1-204ENST00000540738 BTN1A1Q13410 526 aa12.02□□□□□ -0.48
COLCA1-204ENST00000540738 NDUFS8O00217 210 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 NUTF2P61970 127 aaKnown RBP12.02□□□□□ -0.49
COLCA1-204ENST00000540738 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 PPP1R27Q86WC6 154 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 A0A1W2PPQ1 181 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 PQLC2LA1A4F0 135 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 RPL7P18124 248 aaKnown RBP12.02□□□□□ -0.49
COLCA1-204ENST00000540738 COLCA1Q6ZS62 124 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 FBLIM1Q8WUP2 373 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 PIN1P1O15428 100 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 LINC00869P0C866 280 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 OVCH2Q7RTZ1 564 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 ZNF429Q86V71 674 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 SLC25A28Q96A46 364 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 ARID1AO14497 2285 aa12.02□□□□□ -0.49
COLCA1-204ENST00000540738 ZNF137PP52743 207 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 SPNP16150 400 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 ZNF680Q8NEM1 530 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 GPR132Q9UNW8 380 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 YTHDF2Q9Y5A9 579 aaKnown RBP12.01□□□□□ -0.49
COLCA1-204ENST00000540738 TMEM133Q9H2Q1 129 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 CTXND1A0A1B0GTU2 59 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 COL8A1P27658 744 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 TM2D1Q9BX74 207 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 TCF19Q9Y242 345 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 DOCK4Q8N1I0 1966 aa12.01□□□□□ -0.49
COLCA1-204ENST00000540738 DRAM1Q8N682 238 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 FAM169BQ8N8A8 192 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 CRIM1Q9NZV1 1036 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 P01737 135 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 KLK2P20151 261 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 CRYGSP22914 178 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 NCMAPQ5T1S8 102 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 IGF2-ASQ6U949 168 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 UQCC3Q6UW78 93 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 WDR82Q6UXN9 313 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 TNFRSF14Q92956 283 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 ADAM11O75078 769 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 HLA-DQB1P01920 261 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 SLC7A5P1Q8MH63 180 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 ARPC1AQ92747 370 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 MMP26Q9NRE1 261 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 TRAV20A0A0B4J274 112 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 OR13A1Q8NGR1 328 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 C8orf46Q8TAG6 207 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 SLC25A33Q9BSK2 321 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 LYNX1G3V0Z9 82 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 LYNX1P0DP58 116 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 ASPHD2Q6ICH7 369 aa12□□□□□ -0.49
COLCA1-204ENST00000540738 C11orf94C9JXX5 98 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 UNC119Q13432 240 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 FBXL15Q9H469 300 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 NTF3P20783 257 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 PSG9Q00887 426 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 RBKSQ9H477 322 aa11.99□□□□□ -0.49
COLCA1-204ENST00000540738 TRAV40A0A0B4J280 105 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms