RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CLDN18P56856 261 aa9.46□□□□□ -0.9
PBX1-212ENST00000540236 CATR1Q13166 79 aa9.46□□□□□ -0.9
PBX1-212ENST00000540236 VKORC1L1Q8N0U8 176 aa9.46□□□□□ -0.9
PBX1-212ENST00000540236 C18orf15Q96N68 181 aa9.46□□□□□ -0.9
PBX1-212ENST00000540236 FSCN3Q9NQT6 498 aa9.46□□□□□ -0.9
PBX1-212ENST00000540236 CD38P28907 300 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 ZNF141Q15928 474 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 C3AR1Q16581 482 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 PPIL1Q9Y3C6 166 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 FCGR3BO75015 233 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 PDCD6O75340 191 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 LCN2P80188 198 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 Q6ZSR6 202 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 C3orf56Q8N813 242 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 ADTRPQ96IZ2 230 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 BMFQ96LC9 184 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 ZNF355PQ9NSJ1 428 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 TRAV8-6A0A0B4J262 113 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 SPAARA0A1B0GVQ0 90 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 CXorf1O96002 111 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 PRSS1P07477 247 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 SPINK8P0C7L1 97 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 FRMD6-AS1P0C7T7 363 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 HOXC12P31275 282 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 SLAQ13239 276 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 DEFB133Q30KQ1 61 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 SCCPDHQ8NBX0 429 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 A1L4Q6 167 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 CGAP01215 116 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 TIMM23BQ5SRD1 257 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 OR4A5Q8NH83 315 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
PBX1-212ENST00000540236 THAP10Q9P2Z0 257 aaPredicted RBP9.45□□□□□ -0.9
PBX1-212ENST00000540236 PATJQ8NI35 1801 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 IGHV2OR16-5A0A0B4J2B6 119 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 A0A0G2JMM0 328 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 KIR2DS1A0A191URI9 304 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 A0A1W2PPB8 328 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 C5orf63A6NC05 138 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 KIR3DP1A8MWS1 328 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 VSTM5A8MXK1 200 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 APELAP0DMC3 54 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 KIR2DS4P43632 304 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 RBPJQ06330 500 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 KIR2DS1Q14954 304 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 ZNF525Q8N782 197 aa9.45□□□□□ -0.9
PBX1-212ENST00000540236 SOX21Q9Y651 276 aaPredicted RBP9.45□□□□□ -0.9
PBX1-212ENST00000540236 IGLC7A0M8Q6 106 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 TAS2R45P59539 299 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 LRRC75BQ2VPJ9 315 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 LINC00869P0C866 280 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 TIMP3P35625 211 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 DMWDQ09019 674 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 ALKBH6Q3KRA9 238 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 TSC2P49815 1807 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 LCTP09848 1927 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 KBTBD11-OT1A0A1B0GTJ5 212 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 K7ERJ3 54 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 KIR3DX1Q9H7L2 352 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 TSPAN2O60636 221 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 HLA-DRB1P01911 266 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 HOXB2P14652 356 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 PRDX4Q13162 271 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 MSI2Q96DH6 328 aaKnown RBP9.44□□□□□ -0.9
PBX1-212ENST00000540236 TMEM38BQ9NVV0 291 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 RRHO14718 337 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 LMO1P25800 156 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 SERF2P84101 59 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 RHBDD2Q6NTF9 364 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 ANKRD37Q7Z713 158 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 NT5CQ8TCD5 201 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 PDE4DIPQ5VU43 2346 aa9.44□□□□□ -0.9
PBX1-212ENST00000540236 DOCK3Q8IZD9 2030 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 RPL31P62899 125 aaKnown RBP9.43□□□□□ -0.9
PBX1-212ENST00000540236 CUTCQ9NTM9 273 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 OR51B2Q9Y5P1 312 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 ALPK3Q96L96 1907 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 IGHV3-21A0A0B4J1V1 117 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 PPIFP30405 207 aaKnown RBP9.43□□□□□ -0.9
PBX1-212ENST00000540236 EMP1P54849 157 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
PBX1-212ENST00000540236 HIF1ANQ9NWT6 349 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 GNG12Q9UBI6 72 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 IGKV1D-13A0A0B4J2D9 117 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 B5MCH6 92 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 COX7A2P2O60397 106 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 IGKV1-13P0DP09 117 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 IGFBP7Q16270 282 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 OR2M7Q8NG81 312 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 NPCDR1Q9BY65 106 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 OBP2BQ9NPH6 170 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 LOC102723996A0A087X1L8 192 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 APOMO95445 188 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 OR5A2Q8NGI9 324 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 VSTM2LQ96N03 204 aa9.43□□□□□ -0.9
PBX1-212ENST00000540236 SAP30LQ9HAJ7 183 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms