RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TRAV3A0A0B4J244 114 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 FAM90A26D6RGX4 464 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 AP4M1O00189 453 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 SLC31A2O15432 143 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 IFNA17P01571 189 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 FFAR4Q5NUL3 377 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 OR10P1Q8NGE3 313 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 Q8TCH9 128 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 R3HDM4Q96D70 268 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 MALSU1Q96EH3 234 aa9.56□□□□□ -0.88
C11orf54-214ENST00000540113 M0R1X1 148 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 RAB29O14966 203 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 MAS1LP35410 378 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 CD81P60033 236 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 MORN2Q502X0 79 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 C1orf185Q5T7R7 199 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 TGIF2LYQ8IUE0 185 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 DEFB108BQ8NET1 73 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 OR10G4Q8NGN3 311 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 OR10G9Q8NGN4 311 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 OR10G7Q8NGN6 311 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 ITLN1Q8WWA0 313 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 RPUSD4Q96CM3 377 aaKnown RBP9.55□□□□□ -0.88
C11orf54-214ENST00000540113 METTL1Q9UBP6 276 aaKnown RBP9.55□□□□□ -0.88
C11orf54-214ENST00000540113 TET2Q6N021 2002 aaPredicted RBP9.55□□□□□ -0.88
C11orf54-214ENST00000540113 A0A087WWC5 75 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 IFNL4K9M1U5 179 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 KLK10O43240 276 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 TRGC2P03986 189 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 DUTP33316 252 aaKnown RBP9.55□□□□□ -0.88
C11orf54-214ENST00000540113 EIF2S3P41091 472 aaKnown RBP9.55□□□□□ -0.88
C11orf54-214ENST00000540113 CLEC12BQ2HXU8 276 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 SPNS3Q6ZMD2 512 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 NECAP1Q8NC96 275 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 TMEM147Q9BVK8 224 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 TOLLIPQ9H0E2 274 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 HIPK2Q9H2X6 1198 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 MAP1BP46821 2468 aaKnown RBP9.55□□□□□ -0.88
C11orf54-214ENST00000540113 DSCAMO60469 2012 aa9.55□□□□□ -0.88
C11orf54-214ENST00000540113 SRRM5B3KS81 715 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 MRGPRGQ86SM5 289 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 NPCDR1Q9BY65 106 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 DCHS1Q96JQ0 3298 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 SMCO3A2RU48 225 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 C15orf62A8K5M9 175 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 GFRA3O60609 400 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 ADIRFQ15847 76 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 TIMM23BQ5SRD1 257 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 GFI1BQ5VTD9 330 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 PINX1Q96BK5 328 aaKnown RBP9.54□□□□□ -0.88
C11orf54-214ENST00000540113 HSD17B10Q99714 261 aaKnown RBP9.54□□□□□ -0.88
C11orf54-214ENST00000540113 SEBOXQ9HB31 216 aaPredicted RBP9.54□□□□□ -0.88
C11orf54-214ENST00000540113 GVINP1Q7Z2Y8 2422 aa9.54□□□□□ -0.88
C11orf54-214ENST00000540113 IFITM10A6NMD0 228 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 NKX6-1P78426 367 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 FAM27E3Q08E93 113 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 PRAMEF5Q5TYX0 476 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 WDR25Q64LD2 544 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 ZNF66Q6ZN08 573 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 OR5T1Q8NG75 326 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 RAB24Q969Q5 203 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 SNRNP40Q96DI7 357 aaKnown RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 SMIM7Q9BQ49 75 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 DCAF16Q9NXF7 216 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 DOK5Q9P104 306 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 MUC6Q6W4X9 2439 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 RAI1Q7Z5J4 1906 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 TRAV38-1A0A0B4J264 116 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 RRHO14718 337 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 CYB5R3P00387 301 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 S100A9P06702 114 aaKnown RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 MYOD1P15172 320 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 LOXL3P58215 753 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 C1QL4Q86Z23 238 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 OR4F5Q8NH21 305 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 OR4F4Q96R69 305 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 PARD6GQ9BYG4 376 aaPredicted RBP9.53□□□□□ -0.88
C11orf54-214ENST00000540113 OR6C3Q9NZP0 311 aa9.53□□□□□ -0.88
C11orf54-214ENST00000540113 YLPM1P49750 1951 aaKnown RBP9.52□□□□□ -0.88
C11orf54-214ENST00000540113 HIST1H2BKO60814 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 PAGE4O60829 102 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 IFNA10P01566 189 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 CRYAAP02489 173 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BJP06899 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 ADH4P08319 380 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BOP23527 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BBP33778 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 TIMP3P35625 211 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BDP58876 126 aa9.52□□□□□ -0.89
C11orf54-214ENST00000540113 HIST1H2BCP62807 126 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms