RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 LRRC3CA6NJW4 275 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 GHRHP01286 108 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 IL9P15248 144 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 CBLN1P23435 193 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 POU3F1Q03052 451 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-214ENST00000540109 ANKRD39Q53RE8 183 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 ULBP2Q9BZM5 246 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 ANXA10Q9UJ72 324 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 COA3Q9Y2R0 106 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-214ENST00000540109 TRBV5-7A0A0A0MS05 114 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 A0A0G2JK05 382 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 C3orf85A0A1B0GTC6 90 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 MSGN1A6NI15 193 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 PLPP3O14495 311 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 PDCD6O75340 191 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 AMY1AP04745 511 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 SRIP30626 198 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 CEACAM3P40198 252 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 EGR4Q05215 589 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 MYBPHQ13203 477 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 ALKBH6Q3KRA9 238 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 RNFT1Q5M7Z0 435 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 PAPPA-AS1Q5QFB9 102 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 MAFAQ8NHW3 353 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-214ENST00000540109 MBNL3Q9NUK0 354 aaKnown RBP5.22□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF257Q9Y2Q1 563 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 CD5LO43866 347 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 PRSS1P07477 247 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 FAHP16930 419 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 CD33P20138 364 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 RHOGP84095 191 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 SHBQ15464 509 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 CTSBP07858 339 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 SLC36A1Q7Z2H8 476 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 FAM19A2Q8N3H0 131 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 STRADBQ9C0K7 418 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 IGHV5-10-1A0A0J9YXX1 117 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 SHISA3A0PJX4 238 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 TSPAN13O95857 204 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 RPL7P18124 248 aaKnown RBP5.22□□□□□ -1.57
PTPRD-214ENST00000540109 KIR3DL2P43630 455 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 RND2P52198 227 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 ERHP84090 104 aaKnown RBP5.22□□□□□ -1.57
PTPRD-214ENST00000540109 LYZL2Q7Z4W2 148 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 C10orf126Q8N4M7 172 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 OR10G3Q8NGC4 313 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 MUCL1Q96DR8 90 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 UTRNP46939 3433 aa5.22□□□□□ -1.57
PTPRD-214ENST00000540109 NCBP2LA6PVI3 153 aaKnown RBP5.21□□□□□ -1.57
PTPRD-214ENST00000540109 EFSO43281 561 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF137PP52743 207 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 TIMM23BQ5SRD1 257 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 SLC35E4Q6ICL7 350 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 CBLN3Q6UW01 205 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 DOLPP1Q86YN1 238 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 OSR2Q8N2R0 312 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 KLK13Q9UKR3 277 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 PIGLQ9Y2B2 252 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 PPP1R17O96001 155 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 ISG15P05161 165 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 MST1P26927 711 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 CFHR1Q03591 330 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 MEF2CQ06413 473 aaPredicted RBP5.21□□□□□ -1.57
PTPRD-214ENST00000540109 ANXA2RQ3ZCQ2 193 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 LSM10Q969L4 123 aaKnown RBP5.21□□□□□ -1.57
PTPRD-214ENST00000540109 AGMATQ9BSE5 352 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 CSTL1Q9H114 145 aa5.21□□□□□ -1.57
PTPRD-214ENST00000540109 PPIAL4EA0A075B759 164 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 IGLV1-36A0A0B4J1U3 117 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 A1L4Q6 167 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 SERF1AO75920 110 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 MT-CO3P00414 261 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 PPIAL4FP0DN26 164 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 ZXDAP98168 799 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 HSD52Q0P140 79 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 SRSF9Q13242 221 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPRD-214ENST00000540109 WDR38Q5JTN6 314 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 MRPL14Q6P1L8 145 aaKnown RBP5.21□□□□□ -1.58
PTPRD-214ENST00000540109 SLC23A3Q6PIS1 610 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 GP6Q9HCN6 339 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 MRM2Q9UI43 246 aaKnown RBP5.21□□□□□ -1.58
PTPRD-214ENST00000540109 SCN3AQ9NY46 2000 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 H7C2G1 150 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 UPK3AO75631 287 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 LEPROTL1O95214 131 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 TDGF1P13385 188 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 CCL7P80098 99 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 FOXL1Q12952 345 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 SCGB1D4Q6XE38 83 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 C1orf174Q8IYL3 243 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-214ENST00000540109 OR8B2Q96RD0 313 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 SRP19P09132 144 aaKnown RBP5.21□□□□□ -1.58
PTPRD-214ENST00000540109 OR2M7Q8NG81 312 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 OR2K2Q8NGT1 345 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 OR1L1Q8NH94 360 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 PBOV1Q9GZY1 135 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 MED29Q9NX70 200 aa5.21□□□□□ -1.58
PTPRD-214ENST00000540109 MRPL27Q9P0M9 148 aaKnown RBP5.21□□□□□ -1.58
PTPRD-214ENST00000540109 OR2W1Q9Y3N9 320 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms