RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PCBD1P61457 104 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 C3AR1Q16581 482 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 NRN1LQ496H8 165 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF766Q5HY98 468 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 TSPO2Q5TGU0 170 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 MEX3BQ6ZN04 569 aaKnown RBP6.46□□□□□ -1.38
CCDC60-204ENST00000539847 C1orf122Q6ZSJ8 110 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 ANKRD37Q7Z713 158 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 GBGT1Q8N5D6 347 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF525Q8N782 197 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 TMEM178AQ8NBL3 297 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 MDS2Q8NDY4 140 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 OR11L1Q8NGX0 322 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 OR1F12Q8NHA8 337 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 DNAJA3Q96EY1 480 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 SNX22Q96L94 193 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 GPR173Q9NS66 373 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 SLC7A10Q9NS82 523 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 SLC39A9Q9NUM3 307 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 FKBP11Q9NYL4 201 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 TAAR3PQ9P1P4 343 aa6.46□□□□□ -1.38
CCDC60-204ENST00000539847 C19orf25Q9UFG5 118 aaPredicted RBP6.46□□□□□ -1.38
CCDC60-204ENST00000539847 IGKV1-27A0A075B6S5 117 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 IGKV1-12A0A0C4DH73 117 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF816-ZNF321PA0A0X1KG74 233 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 CTXND1A0A1B0GTU2 59 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 SLC22A20A6NK97 555 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 TP53I11O14683 189 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 DLEU1O43261 78 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 SYNGR2O43760 224 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 CST7O76096 145 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 IGKV1D-12P01611 117 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 FREM3P0C091 2139 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 COX5BP10606 129 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 OMGP23515 440 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 CEBPGP53567 150 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 YPEL3P61236 119 aaPredicted RBP6.45□□□□□ -1.38
CCDC60-204ENST00000539847 RPL23P62829 140 aaKnown RBP6.45□□□□□ -1.38
CCDC60-204ENST00000539847 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF154Q13106 437 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 MSMO1Q15800 293 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 SLC25A24Q6NUK1 477 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF880Q6PDB4 577 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 C16orf82Q7Z2V1 217 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 GPR146Q96CH1 333 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 SMIM7Q9BQ49 75 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 SNHG12Q9BXW3 62 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 WDR61Q9GZS3 305 aaKnown RBP6.45□□□□□ -1.38
CCDC60-204ENST00000539847 CXXC4Q9H2H0 198 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 OR51I2Q9H344 312 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF442Q9H7R0 627 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 PLEK2Q9NYT0 353 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 KLRF1Q9NZS2 232 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 ALPK2Q86TB3 2170 aa6.45□□□□□ -1.38
CCDC60-204ENST00000539847 AKAP6Q13023 2319 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 A0A1B0GV50 99 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 hCG_38984A0A1B0GV85 526 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 C5orf63A6NC05 138 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 GJE1A6NN92 205 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 CEBPZOSA8MTT3 80 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF705GA8MUZ8 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC60-204ENST00000539847 C19orf84I3L1E1 186 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 PRRG2O14669 202 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 TNFSF11O14788 317 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 PSPNO60542 156 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 TNFSF13O75888 250 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 SERPINE2P07093 398 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ASCL1P50553 236 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 CNN1P51911 297 aaKnown RBP6.44□□□□□ -1.38
CCDC60-204ENST00000539847 KRTAP10-9P60411 292 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 FGF12P61328 243 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 HERPUD1Q15011 391 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 OR1C1Q15619 314 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF726P1Q15940 193 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 RIPPLY2Q5TAB7 128 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 CARD17Q5XLA6 110 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 CFAP161Q6P656 301 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF818PQ6ZRF7 136 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 CPEB2Q7Z5Q1 589 aaKnown RBP6.44□□□□□ -1.38
CCDC60-204ENST00000539847 PRSS58Q8IYP2 241 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 GAPTQ8N292 157 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ARL6IP6Q8N6S5 226 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 TCTEX1D1Q8N7M0 179 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 NPRL2Q8WTW4 380 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 TAF15Q92804 592 aaKnown RBP eCLIP6.44□□□□□ -1.38
CCDC60-204ENST00000539847 LHX4Q969G2 390 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 SPACA9Q96E40 222 aaPredicted RBP6.44□□□□□ -1.38
CCDC60-204ENST00000539847 FOXC2Q99958 501 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 MIEN1Q9BRT3 115 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ZNF665Q9H7R5 613 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 METTL7AQ9H8H3 244 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 NAGKQ9UJ70 344 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 LAMP3Q9UQV4 416 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 GOLT1BQ9Y3E0 138 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 GTF3C1Q12789 2109 aa6.44□□□□□ -1.38
CCDC60-204ENST00000539847 INTS1Q8N201 2190 aaKnown RBP6.44□□□□□ -1.38
CCDC60-204ENST00000539847 ZFP92A6NM28 416 aa6.43□□□□□ -1.38
CCDC60-204ENST00000539847 CD300LBA8K4G0 201 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms