RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 IGHV1-3A0A0C4DH29 117 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 H0YJW9 148 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 H7C2Y5 167 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 ATG12O94817 140 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 OR2A4O95047 310 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 CRYZL1O95825 349 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 RRASP10301 218 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 EPHA1P21709 976 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 VDAC1P21796 283 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 CYB5R2Q6BCY4 276 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 MOB3BQ86TA1 216 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 OR5AN1Q8NGI8 311 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 WDR89Q96FK6 387 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-204ENST00000539721 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 PLEKHA2Q9HB19 425 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 TRAV40A0A0B4J280 105 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 J3QLI3 93 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
TRAF3-204ENST00000539721 NPFFO15130 113 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 RAP2BP61225 183 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 IAH1Q2TAA2 248 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-204ENST00000539721 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-204ENST00000539721 TCTE3Q8IZS6 198 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-204ENST00000539721 ASB13Q8WXK3 278 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 RRNAD1Q96FB5 475 aaKnown RBP13.07□□□□□ -0.32
TRAF3-204ENST00000539721 C2orf50Q96LR7 162 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 COMMD9Q9P000 198 aa13.07□□□□□ -0.32
TRAF3-204ENST00000539721 IGHV3OR16-10A0A075B7F0 116 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 KRASP01116 189 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 IGKV1-5P01602 117 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 MC5RP33032 325 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 G6PCP35575 357 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 MIDNQ504T8 468 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 NMSQ5H8A3 153 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 LSM10Q969L4 123 aaKnown RBP13.06□□□□□ -0.32
TRAF3-204ENST00000539721 R3HDM4Q96D70 268 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 SPIN2AQ99865 258 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 SPIN2BQ9BPZ2 258 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 RANBP3Q9H6Z4 567 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-204ENST00000539721 GSKIPQ9P0R6 139 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 WASHC3Q9Y3C0 194 aa13.06□□□□□ -0.32
TRAF3-204ENST00000539721 IGHV3-72A0A0B4J1Y9 119 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 A0A0G2JRQ6 117 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 A0A1W2PPI3 338 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 SMLR1H3BR10 107 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 SAA4P35542 130 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 RAB13P51153 203 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 CYCSP99999 105 aaKnown RBP13.05□□□□□ -0.32
TRAF3-204ENST00000539721 SRSF4Q08170 494 aaKnown RBP13.05□□□□□ -0.32
TRAF3-204ENST00000539721 SSX2Q16385 188 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 THOC7Q6I9Y2 204 aaKnown RBP13.05□□□□□ -0.32
TRAF3-204ENST00000539721 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 OR8H3Q8N146 312 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 OR2T35Q8NGX2 323 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 GPR146Q96CH1 333 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 RBMXL1Q96E39 390 aaKnown RBP13.05□□□□□ -0.32
TRAF3-204ENST00000539721 NMES1Q9C002 83 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 CCDC168Q8NDH2 2452 aa13.05□□□□□ -0.32
TRAF3-204ENST00000539721 MARCH11A6NNE9 402 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 OOSP1A8MZH6 123 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 AVPP01185 164 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 IGKV1-16P04430 117 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 NQO2P16083 231 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 ERVK-16P61578 105 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 CCDC144NLQ6NUI1 221 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-204ENST00000539721 DMBX1Q8NFW5 382 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 C17orf50Q8WW18 174 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 MMP24Q9Y5R2 645 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 TIMM23O14925 209 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 HNRNPCP07910 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF3-204ENST00000539721 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 SSX9Q7RTT3 188 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 FAM219AQ8IW50 185 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 DYNAPQ8N1N2 210 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 PPP1R14BQ96C90 147 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 FLYWCH2Q96CP2 140 aaKnown RBP13.04□□□□□ -0.32
TRAF3-204ENST00000539721 MALSU1Q96EH3 234 aa13.04□□□□□ -0.32
TRAF3-204ENST00000539721 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 BOLA2-SMG1P6H3BVE0 249 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 SHOXO15266 292 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 HRASP01112 189 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 PAX6P26367 422 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 IZUMO4Q1ZYL8 232 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 TMEM177Q53S58 311 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 H2BFWTQ7Z2G1 175 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 OR4C13Q8NGP0 309 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 OSR1Q8TAX0 266 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-204ENST00000539721 HARBI1Q96MB7 349 aa13.03□□□□□ -0.32
TRAF3-204ENST00000539721 A0A1B0GU03 582 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 RPS16P62249 146 aaKnown RBP13.02□□□□□ -0.32
TRAF3-204ENST00000539721 SMCO1Q147U7 214 aa13.02□□□□□ -0.32
TRAF3-204ENST00000539721 ZFP69Q49AA0 526 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms