RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 RUNX1Q01196 453 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 NCR3LG1Q68D85 454 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 MUC15Q8N387 334 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 SCGB1C1Q8TD33 95 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 DYNLRB1Q9NP97 96 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 NUPL2O15504 423 aaKnown RBP16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 PROP1O75360 226 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 GUK1Q16774 197 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 AKR1C8PQ5T2L2 129 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 DUX4L9Q6RFH8 374 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 C17orf50Q8WW18 174 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 EGLN1Q9GZT9 426 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 SAP30LQ9HAJ7 183 aa16.72■□□□□ 0.27
PACSIN3-211ENST00000539589 M0R1X1 148 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 DNASE2O00115 360 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 ZNF134P52741 427 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 THNSL2Q86YJ6 484 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 ZNF843Q8N446 348 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 PBDC1Q9BVG4 233 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 EIF5A2Q9GZV4 153 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 IFI27L2Q9H2X8 130 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 MS4A5Q9H3V2 200 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 GFOD1Q9NXC2 390 aa16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 SPTAN1Q13813 2472 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-211ENST00000539589 A0A1W2PPR1 153 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 MARCH11A6NNE9 402 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 FAM157AC9JC47 383 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 C9JQL5 133 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 RBMXL2O75526 392 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 HPRT1P00492 218 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 ARL16Q0P5N6 197 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 DPPA3Q6W0C5 159 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 LILRB2Q8N423 598 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 ZNF525Q8N782 197 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 R3HDM4Q96D70 268 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 GAB2Q9UQC2 676 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 MYO18BQ8IUG5 2567 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 FCGR3BO75015 233 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 IGHV3-7P01780 117 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 TMEM14EPQ6UXP3 125 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 HAPLN4Q86UW8 402 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 FAM216BQ8N7L0 139 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 COL12A1Q99715 3063 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 ABHD14AQ9BUJ0 271 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 PRELID3BQ9Y3B1 194 aa16.7■□□□□ 0.26
PACSIN3-211ENST00000539589 NKX6-3A6NJ46 265 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 RBFOX2O43251 390 aaKnown RBP eCLIP16.69■□□□□ 0.261e-8■■■■□ 23.6
PACSIN3-211ENST00000539589 RPL39P5Q59GN2 51 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 CIB3Q96Q77 187 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 SCRT1Q9BWW7 348 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 RALYQ9UKM9 306 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 DOPEY1Q5JWR5 2465 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 TRAV38-1A0A0B4J264 116 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 BTBD17A6NE02 478 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 ZNF729A6NN14 1252 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 H2AFB1P0C5Y9 115 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 IGFBP2P18065 325 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 KIR2DS2P43631 304 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 C1orf87Q8N0U7 546 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 CORO2AQ92828 525 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 FBXO7Q9Y3I1 522 aa16.69■□□□□ 0.26
PACSIN3-211ENST00000539589 FAM74A7A6NL05 159 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 OR8U8P0C7N1 319 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 RNF224P0DH78 156 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 PPT1P50897 306 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 TLE4Q04727 773 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 TMEM30BQ3MIR4 351 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 FAM74A3Q4VXF1 159 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 DTD1Q8TEA8 209 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 S1PR3Q99500 378 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 LINC00574Q9H8X3 128 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 IDI2-AS1Q9NZ38 188 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 KPTNQ9Y664 436 aa16.68■□□□□ 0.26
PACSIN3-211ENST00000539589 A0A1B0GW64 132 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 FAM90A9PA6NNJ1 464 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 TMEM178BH3BS89 294 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 TMPRSS2O15393 492 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 SLC31A2O15432 143 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 F12P00748 615 aaPredicted RBP16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 LRRC75BQ2VPJ9 315 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 CT45A1Q5HYN5 189 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 TCF23Q7RTU1 214 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 CT45A3Q8NHU0 189 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 CCL17Q92583 94 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 PARD6GQ9BYG4 376 aaPredicted RBP16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 A0A1B0GV50 99 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 hADV38S2A0JD32 116 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 SLC38A11Q08AI6 406 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 LEAP2Q969E1 77 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 PSMG3Q9BT73 122 aaPredicted RBP16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 TMEM106BQ9NUM4 274 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 USF3Q68DE3 2245 aa16.67■□□□□ 0.26
PACSIN3-211ENST00000539589 CEBPZOSA8MTT3 80 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 GPR37O15354 613 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 PPIHO43447 177 aaKnown RBP16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 NFYBP25208 207 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 ERVK-16P61578 105 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 OR8G2PQ6IF36 304 aa16.66■□□□□ 0.26
PACSIN3-211ENST00000539589 OR4C12Q96R67 309 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms