RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 IL3RAP26951 378 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 CHRNA7P36544 502 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 MPLP40238 635 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 RPS16P62249 146 aaKnown RBP8.07□□□□□ -1.12
CDH13-204ENST00000539548 PSG7Q13046 419 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 AARDQ4LEZ3 155 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 DCAF10Q5QP82 559 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 BTNL3Q6UXE8 466 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 LINC00696Q6ZRV3 163 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 VASH2Q86V25 355 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 C11orf53Q8IXP5 236 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 DMRTC2Q8IXT2 367 aaPredicted RBP8.07□□□□□ -1.12
CDH13-204ENST00000539548 COQ2Q96H96 371 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 LURAP1Q96LR2 239 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 TXNDC17Q9BRA2 123 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 KLF13Q9Y2Y9 288 aaPredicted RBP8.07□□□□□ -1.12
CDH13-204ENST00000539548 CFAP54Q96N23 3096 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 GTF3C1Q12789 2109 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 LINC00473A8K010 186 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 C9orf172C9J069 976 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 KLRC4-KLRK1H3BQV0 150 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 RBMXL2O75526 392 aaKnown RBP8.07□□□□□ -1.12
CDH13-204ENST00000539548 PDGFBP01127 241 aaPredicted RBP8.07□□□□□ -1.12
CDH13-204ENST00000539548 CD82P27701 267 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 CD1BP29016 333 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 SSX2Q16385 188 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 IQCJQ1A5X6 159 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 FAM78BQ5VT40 261 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 TMEM105Q8N8V8 129 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
CDH13-204ENST00000539548 PTPRBP23467 1997 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 IGHV3-64DA0A0J9YX35 117 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 A0A0U1RQK1 487 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 ZNF320A2RRD8 509 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 FAM90A9PA6NNJ1 464 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 C21orf140B9A014 251 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 WNT9BO14905 357 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 MPDU1O75352 247 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 NDUFB4O95168 129 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 PRSS8Q16651 343 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 ACP7Q6ZNF0 438 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
CDH13-204ENST00000539548 MDS2Q8NDY4 140 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 MRGPRDQ8TDS7 321 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 CHODLQ9H9P2 273 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 WASF3Q9UPY6 502 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 TRAPPC1Q9Y5R8 145 aa8.06□□□□□ -1.12
CDH13-204ENST00000539548 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 A0A1W2PPV4 95 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 MARCH11A6NNE9 402 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 GALR2O43603 387 aaPredicted RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 CRYAAP02489 173 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 DEFA4P12838 97 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 ATP5G3P48201 142 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 RAB4BP61018 213 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 UBE2NP61088 152 aaKnown RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 PAX5Q02548 391 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 TRIP6Q15654 476 aaKnown RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 SPINK9Q5DT21 86 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 CST9LP1Q5W188 147 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 Q6ZR03 302 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 R3HDM4Q96D70 268 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 QTRT1Q9BXR0 403 aaKnown RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 TRAV38-1A0A0B4J264 116 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 IFNL4K9M1U5 179 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 LAMTOR5O43504 91 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 TNFSF15O95150 251 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 SNRPCP09234 159 aaKnown RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 OR4A8P0C604 315 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 OR9G9P0C7N8 305 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 FOSL1P15407 271 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 EGR1P18146 543 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 MPV17P39210 176 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 OPRK1P41145 380 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 GABRA2P47869 451 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 EDDM3BP56851 147 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 SOX8P57073 446 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 SPCS3P61009 180 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 RPP30P78346 268 aaKnown RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 HTD2P86397 168 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 TGFBR3Q03167 851 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 FOXF2Q12947 444 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 GCSAMLQ5JQS6 135 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 ZNF826PQ6ZT77 177 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 KLF14Q8TD94 323 aaPredicted RBP8.05□□□□□ -1.12
CDH13-204ENST00000539548 DEFB127Q9H1M4 99 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 CXXC4Q9H2H0 198 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 OBP2BQ9NPH6 170 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 FKBP11Q9NYL4 201 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 ELOVL5Q9NYP7 299 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 FOXJ2Q9P0K8 574 aa8.05□□□□□ -1.12
CDH13-204ENST00000539548 WDFY3Q8IZQ1 3526 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 ADH4P08319 380 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 C1QTNF9P0C862 333 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 SELLP14151 372 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 IGHV1-2P23083 117 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 TMPRSS3P57727 454 aa8.04□□□□□ -1.12
CDH13-204ENST00000539548 LINC00205P59089 165 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms