RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 OR2T10Q8NGZ9 312 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 FAM234AQ9H0X4 552 aa10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 PATZ1Q9HBE1 687 aaKnown RBP10.54□□□□□ -0.72
SFSWAP-208ENST00000539506 DEFB108AA8MXU0 73 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 LYZL6O75951 148 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 CEACAM6P40199 344 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 ATP5G3P48201 142 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 PSMB3P49720 205 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 FGFRL1Q8N441 504 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 OR5R1Q8NH85 324 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 ABHD14BQ96IU4 210 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 NEU1Q99519 415 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 M0R296 226 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 TFPI2P48307 235 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 ZNF766Q5HY98 468 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 OR8G5Q8NG78 346 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 OR1L1Q8NH94 360 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 RAB24Q969Q5 203 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 RAB40CQ96S21 281 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 ZDHHC11Q9H8X9 412 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 PAM16Q9Y3D7 125 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 PCNX2A6NKB5 2137 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 IGHV3-43A0A0B4J1X8 118 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 ZG16O60844 167 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 IGHV3-43DP0DP04 118 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 EDDM3BP56851 147 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 RFESDQ8TAC1 157 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 FKBP11Q9NYL4 201 aa10.53□□□□□ -0.72
SFSWAP-208ENST00000539506 PSPNO60542 156 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 KBTBD11O94819 623 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 NDUFB4O95168 129 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 CD46P15529 392 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 MPV17P39210 176 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 PPP1CBP62140 327 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 PSG7Q13046 419 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 MBD3L1Q8WWY6 194 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 FER1L6-AS2Q96M78 137 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 TBX15Q96SF7 602 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 TRAPPC1Q9Y5R8 145 aa10.52□□□□□ -0.72
SFSWAP-208ENST00000539506 NPIPB11E5RHQ5 1161 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 NPSP0C0P6 89 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 HBG1P69891 147 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 HBG2P69892 147 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 ARG2P78540 354 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 SLC25A40Q8TBP6 338 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM18Q96B42 140 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 C5orf30Q96GV9 206 aa10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 FAM103A1Q9BTL3 118 aaKnown RBP10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 POLR3KQ9Y2Y1 108 aaPredicted RBP10.52□□□□□ -0.73
SFSWAP-208ENST00000539506 F2Z2F3 143 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 WNT9BO14905 357 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 IFNA1P01562 189 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 GRPP07492 148 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 IL3RAP26951 378 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 S100GP29377 79 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 TBC1D28Q2M2D7 210 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 ZNF826PQ6ZT77 177 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 TP53TG5Q9Y2B4 290 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 LRP5LA4QPB2 252 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 MKRN2OSH3BPM6 223 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 SLC35B1P78383 322 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 Q6ZR03 302 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 CYP2G1PQ6ZSU1 146 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 RTL8AQ9BWD3 113 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 MBNL3Q9NUK0 354 aaKnown RBP10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 ARFGEF3Q5TH69 2177 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 TRAV1-1A0A0B4J248 108 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 C11orf94C9JXX5 98 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 HRASP01112 189 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 RPL30P62888 115 aaKnown RBP10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 ZNF146Q15072 292 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 MAJINQ3KP22 176 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 C11orf53Q8IXP5 236 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 MS4A10Q96PG2 267 aa10.51□□□□□ -0.73
SFSWAP-208ENST00000539506 ROS1P08922 2347 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 SLC17A3O00476 420 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 MLNRO43193 412 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 AGFG2O95081 481 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 CNN1P51911 297 aaKnown RBP10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 DRAM1Q8N682 238 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 ACTR3CQ9C0K3 210 aaPredicted RBP10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM242Q9NWH2 141 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 NKX2-8O15522 239 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 NXPH2O95156 264 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 CBLN1P23435 193 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 TNFSF10P50591 281 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 OR52L2PQ8NGH6 319 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 OR6C3Q9NZP0 311 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
SFSWAP-208ENST00000539506 WNT2P09544 360 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 SLC25A6P12236 298 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 CDKN1AP38936 164 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 SGMS2Q8NHU3 365 aa10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 GMPPAQ96IJ6 420 aaPredicted RBP10.49□□□□□ -0.73
SFSWAP-208ENST00000539506 NOL4LQ96MY1 436 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms