RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 MS4A6AQ9H2W1 248 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 FAM60AQ9NP50 221 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 PNO1Q9NRX1 252 aaKnown RBP5.64□□□□□ -1.51
USP28-207ENST00000538475 CLN8Q9UBY8 286 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 NCKAP5O14513 1909 aa5.64□□□□□ -1.51
USP28-207ENST00000538475 FER1L5A0AVI2 2057 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 ZNF816-ZNF321PA0A0X1KG74 233 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 A0A1W2PS18 150 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 LILRA5A6NI73 299 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 FAM90A9PA6NNJ1 464 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 ZNF891A8MT65 544 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 H0YJW9 148 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 CORTO00230 105 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 CRXO43186 299 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 WISP2O76076 250 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 CXorf1O96002 111 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 IGHEP01854 428 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 CELA3BP08861 270 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 C3orf79P0CE67 100 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 PMCHP20382 165 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 FGF12P61328 243 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 GNB1P62873 340 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 SEC11AP67812 179 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 ARL16Q0P5N6 197 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 MYBPHQ13203 477 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 KLF5Q13887 457 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 RTL8BQ17RB0 113 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 RNF151Q2KHN1 245 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 SMIM21Q3B7S5 101 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 ZNF324BQ6AW86 544 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 ACSM6Q6P461 480 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 PSRC1Q6PGN9 363 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 FBXO46Q6PJ61 603 aaPredicted RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 TEPPQ6URK8 271 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 GTF2H5Q6ZYL4 71 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 MKXQ8IYA7 352 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 C17orf78Q8N4C9 275 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 OR4F17Q8NGA8 305 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 LOXL4Q96JB6 756 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 KLHDC3Q9BQ90 382 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 CHRDL1Q9BU40 450 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 KRTAP4-5Q9BYR2 181 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 MTIF3Q9H2K0 278 aaKnown RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 CDIP1Q9H305 208 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 TUBG2Q9NRH3 451 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 CCL28Q9NRJ3 127 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 KCNIP1Q9NZI2 227 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 PEF1Q9UBV8 284 aaKnown RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 CACNG5Q9UF02 275 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 RBM7Q9Y580 266 aaKnown RBP5.63□□□□□ -1.51
USP28-207ENST00000538475 USF3Q68DE3 2245 aa5.63□□□□□ -1.51
USP28-207ENST00000538475 UBE2L5PA0A1B0GUS4 154 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 A0A1W2PPV4 95 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 SNURFLB1AK76 121 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 G3V3Y1 287 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 DHHO43323 396 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 TRAPPC6AO75865 159 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 NDUFB4O95168 129 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 IGKV1D-33P01593 117 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 IGKV1-33P01594 117 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 AMY1AP04745 511 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 CYC1P08574 325 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 OR5AL1P0C617 328 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 HOXB2P14652 356 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 NPPCP23582 126 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 OPRK1P41145 380 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 PCBD1P61457 104 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 PLP2Q04941 152 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 HYAL1Q12794 435 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 NOGQ13253 232 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 RUNX3Q13761 415 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 RSPO1Q2MKA7 263 aaPredicted RBP5.62□□□□□ -1.51
USP28-207ENST00000538475 PSMG4Q5JS54 123 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 LDLRAD2Q5SZI1 272 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 PRAMEF20Q5VT98 475 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 CLEC2AQ6UVW9 174 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 UNQ5815/PRO19632Q6UWF5 114 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 VASH2Q86V25 355 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 MMD2Q8IY49 270 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 FAM58AQ8N1B3 248 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 MTURNQ8N3F0 131 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 ZNF439Q8NDP4 499 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 OR8B3Q8NGG8 313 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 OR10V1Q8NGI7 309 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 SLC25A40Q8TBP6 338 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 RDH5Q92781 318 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 DPF1Q92782 380 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 SPSB4Q96A44 273 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 APOBEC3DQ96AK3 386 aaPredicted RBP5.62□□□□□ -1.51
USP28-207ENST00000538475 CLDN23Q96B33 292 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 OR8B2Q96RD0 313 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 OR6C1Q96RD1 312 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 NPCDR1Q9BY65 106 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 COMMD5Q9GZQ3 224 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 SLC25A22Q9H936 323 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 GNB4Q9HAV0 340 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 HES4Q9HCC6 221 aa5.62□□□□□ -1.51
USP28-207ENST00000538475 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.62□□□□□ -1.51
USP28-207ENST00000538475 IL19Q9UHD0 177 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms