RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PNRC1Q12796 327 aaPredicted RBP5.5□□□□□ -1.53
USP28-206ENST00000538224 IZUMO4Q1ZYL8 232 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 RNF212Q495C1 297 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 AWAT1Q58HT5 328 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 SP5Q6BEB4 398 aaPredicted RBP5.5□□□□□ -1.53
USP28-206ENST00000538224 ZNF787Q6DD87 383 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 OR8G2PQ6IF36 304 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 TMEM88Q6PEY1 159 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 RBMS3Q6XE24 437 aaKnown RBP5.5□□□□□ -1.53
USP28-206ENST00000538224 HAPLN4Q86UW8 402 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 ZNF429Q86V71 674 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 WFDC8Q8IUA0 241 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 CBLN2Q8IUK8 224 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 CISD2Q8N5K1 135 aaKnown RBP5.5□□□□□ -1.53
USP28-206ENST00000538224 TPRX1Q8N7U7 411 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 Q8NA96 180 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 CLDND2Q8NHS1 167 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 RFESDQ8TAC1 157 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 RND1Q92730 232 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 GAFA1Q96PS6 74 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 OR4C12Q96R67 309 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 VKORC1Q9BQB6 163 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 NIPSNAP3BQ9BS92 247 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 ESRP2Q9H6T0 727 aaKnown RBP5.5□□□□□ -1.53
USP28-206ENST00000538224 RPS10P5Q9NQ39 176 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 MANBALQ9NQG1 85 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 CISD1Q9NZ45 108 aaKnown RBP5.5□□□□□ -1.53
USP28-206ENST00000538224 LINC00312Q9Y6C7 94 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 SVILO95425 2214 aa5.5□□□□□ -1.53
USP28-206ENST00000538224 MUC6Q6W4X9 2439 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 DSCAMO60469 2012 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 CTXND1A0A1B0GTU2 59 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 C7orf77A4D0Y5 90 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 MAP1LC3B2A6NCE7 125 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 C9JQL5 133 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 FNDC10F2Z333 226 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 F12P00748 615 aaPredicted RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 ARG1P05089 322 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 SRP19P09132 144 aaKnown RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 OR4A8P0C604 315 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 BCL2P10415 239 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 FGF7P21781 194 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ATP5IP56385 69 aaPredicted RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 OR2B8PP59922 312 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 RAB5BP61020 215 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 BSPH1Q075Z2 132 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ARL16Q0P5N6 197 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ICAM4Q14773 271 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ADIPOQQ15848 244 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ZNF124Q15973 351 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 POU2AF1Q16633 256 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 LTC4SQ16873 150 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 RTL8BQ17RB0 113 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 C17orf58Q2M2W7 97 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 FAM209BQ5JX69 171 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 NCR3LG1Q68D85 454 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 FAM71F2Q6NXP2 309 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 SLC35E3Q7Z769 313 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 C8orf31Q8N9H6 132 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ZNRF1Q8ND25 227 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 DDB2Q92466 427 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 TVP23CQ96ET8 276 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 RCC1LQ96I51 464 aaKnown RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 RSG1Q9BU20 258 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 SCNM1Q9BWG6 230 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ACTR3CQ9C0K3 210 aaPredicted RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 MAP1LC3BQ9GZQ8 125 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 SAP30LQ9HAJ7 183 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 ENY2Q9NPA8 101 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 SIRT7Q9NRC8 400 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 RPRMQ9NS64 109 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 VAX2Q9UIW0 290 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 RPUSD1Q9UJJ7 312 aaKnown RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 MSRB2Q9Y3D2 182 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 USF3Q68DE3 2245 aa5.49□□□□□ -1.53
USP28-206ENST00000538224 URB1O60287 2271 aaKnown RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 ANKRD11Q6UB99 2663 aaPredicted RBP5.49□□□□□ -1.53
USP28-206ENST00000538224 GVINP1Q7Z2Y8 2422 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 FRYQ5TBA9 3013 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 PPIAL4EA0A075B759 164 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 SAA2-SAA4A0A096LPE2 208 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 A0A1B0GV50 99 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 CXorf65A6NEN9 183 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 DPRXA6NFQ7 191 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 PCP4L1A6NKN8 68 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 C15orf61A6NNL5 157 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 PMS2P5A8MQ11 134 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 DEFB108AA8MXU0 73 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 PPIAL4DF5H284 164 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 CYB5BO43169 146 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 CYB5R3P00387 301 aaPredicted RBP5.48□□□□□ -1.53
USP28-206ENST00000538224 APOA2P02652 100 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 GYPAP02724 150 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 TFF1P04155 84 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 SNRNP70P08621 437 aaKnown RBP5.48□□□□□ -1.53
USP28-206ENST00000538224 SAA2P0DJI9 122 aaPredicted RBP5.48□□□□□ -1.53
USP28-206ENST00000538224 PPIAL4FP0DN26 164 aa5.48□□□□□ -1.53
USP28-206ENST00000538224 OR13C7P0DN81 318 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms