RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ID3Q02535 119 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 LRRC75BQ2VPJ9 315 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 DNAJC13O75165 2243 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 K7EQM0 130 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 HMGB3O15347 200 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 MT-ATP6P00846 226 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 COX5AP20674 150 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 CEACAM3P40198 252 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 FABP6P51161 128 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 LINC00310P59036 64 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 OR5AS1Q8N127 324 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 OR2M3Q8NG83 312 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 FAM222BQ8WU58 562 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 RNF133Q8WVZ7 376 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 FAM206AQ9NX38 181 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 A0A1W2PS18 150 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 C7orf71A4D174 169 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 TMPRSS2O15393 492 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 LINC00869P0C866 280 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 FUT6P51993 359 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 PRTGQ2VWP7 1150 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 DOK3Q7L591 496 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 OR5A1Q8NGJ0 315 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 PSENENQ9NZ42 101 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 KCNIP1Q9NZI2 227 aa9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 KLF13Q9Y2Y9 288 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-207ENST00000537408 SLC22A20A6NK97 555 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 WNT2P09544 360 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 IFI6P09912 130 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 SSR4P51571 173 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 UBE2G1P62253 170 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 CFHR1Q03591 330 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 OR10G9Q8NGN4 311 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 OR10G7Q8NGN6 311 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 GNB1LQ9BYB4 327 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 GPR27Q9NS67 375 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 TIMM9Q9Y5J7 89 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 A6NDN8 102 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 ZNF205O95201 554 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 APOA2P02652 100 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 WDR82Q6UXN9 313 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 C1orf147Q96MC9 270 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 HDHD3Q9BSH5 251 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 NTN3O00634 580 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 UTS2O95399 124 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 IGKV1D-16P01601 117 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 KLRB1Q12918 225 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 KISS1Q15726 138 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 TM2D1Q9BX74 207 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 ULBP2Q9BZM5 246 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 RTN4RQ9BZR6 473 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 F2Z2F3 143 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 M0R2Z0 102 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 PRKNO60260 465 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 FCGR2AP12318 317 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 LIFP15018 202 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 IGLL1P15814 213 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 DAP3P51398 398 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 GPM6AP51674 278 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 JKAMPQ9P055 326 aa9.25□□□□□ -0.93
CLSTN3-207ENST00000537408 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 GABRA6Q16445 453 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 PRAMEF5Q5TYX0 476 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 PRAMEF6Q5VXH4 476 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 FA2HQ7L5A8 372 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 TBC1D26Q86UD7 250 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 ZNF525Q8N782 197 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 C16orf52Q8NHV5 167 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 ANAPC1Q9H1A4 1944 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 TRAV8-6A0A0B4J262 113 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 A0A0G2JMM0 328 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 A0A1W2PPB8 328 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 CD300LBA8K4G0 201 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 KIR3DP1A8MWS1 328 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 NKX2-8O15522 239 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 CT62P0C5K7 136 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 SEC11AP67812 179 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 POU3F1Q03052 451 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 MRAP2Q96G30 205 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 RNF114Q9Y508 228 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 VSTM5A8MXK1 200 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 PLPP3O14495 311 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 PEBP1P30086 187 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 ZNF83P51522 516 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 HSD52Q0P140 79 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 SCCPDHQ8NBX0 429 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 TAF15Q92804 592 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 OR2V2Q96R30 315 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 KIF26BQ2KJY2 2108 aa9.24□□□□□ -0.93
CLSTN3-207ENST00000537408 PLXNA2O75051 1894 aa9.23□□□□□ -0.93
CLSTN3-207ENST00000537408 TRGV8A0A0C4DH27 118 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms