RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR8G5Q8NG78 346 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 DPH3Q96FX2 82 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 AKIRIN1Q9H9L7 192 aaPredicted RBP9.19□□□□□ -0.94
CLIP1-209ENST00000537178 TDRD15B5MCY1 1934 aaKnown RBP9.19□□□□□ -0.94
CLIP1-209ENST00000537178 IGHV5-10-1A0A0J9YXX1 117 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 HRKO00198 91 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 SNRNP200O75643 2136 aaKnown RBP9.19□□□□□ -0.94
CLIP1-209ENST00000537178 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
CLIP1-209ENST00000537178 C8orf88P0DMB2 117 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 CA7P43166 264 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 NUBP1P53384 320 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 HCP5Q6MZN7 132 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 TPRX1Q8N7U7 411 aa9.19□□□□□ -0.94
CLIP1-209ENST00000537178 A0A0J9YW62 118 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 MOSPD3O75425 235 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 NGFRP08138 427 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 C9orf40Q8IXQ3 194 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 DNAJC4Q9NNZ3 241 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 IL36RNQ9UBH0 155 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 MRPS18BQ9Y676 258 aaKnown RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 LNP1A1A4G5 178 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 UPK3AO75631 287 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 DXOO77932 396 aaKnown RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PLAUP00749 431 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 AMY1AP04745 511 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 HSPE1P61604 102 aaKnown RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 KLRB1Q12918 225 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 DNM1P46Q6ZS02 220 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 C10orf111Q8N326 155 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 TTTY12Q9BZ98 90 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PPP1R3EQ9H7J1 279 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 GPR132Q9UNW8 380 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 DSPPQ9NZW4 1301 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PTP4A3O75365 173 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 NMBP08949 121 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PSG4Q00888 419 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 UNC119Q13432 240 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 KRTCAP3Q53RY4 240 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 TIMP4Q99727 224 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PMCHL2Q9BQD1 86 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PRSS27Q9BQR3 290 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 RTN4RQ9BZR6 473 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 CXorf65A6NEN9 183 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 C9orf172C9J069 976 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 FCGR2BP31994 310 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 SLC25A53Q5H9E4 307 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 OR51G1Q8NGK1 321 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 C19orf24Q9BVV8 132 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 SFXN3Q9BWM7 321 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 IGHV3-72A0A0B4J1Y9 119 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 B4E171 279 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 GDF9O60383 454 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 F12P00748 615 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 DLX6P56179 175 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 MIC13Q5XKP0 118 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 SRSF12Q8WXF0 261 aaKnown RBP9.18□□□□□ -0.94
CLIP1-209ENST00000537178 SPSB4Q96A44 273 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 GPR82Q96P67 336 aa9.18□□□□□ -0.94
CLIP1-209ENST00000537178 HELZP42694 1942 aaKnown RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 PGLYRP4Q96LB8 373 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 OR11H12B2RN74 326 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 TMEM229AB2RXF0 380 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 NTN1O95631 604 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 NANOS3P60323 173 aaKnown RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 SRSF5Q13243 272 aaKnown RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 OR11H1Q8NG94 326 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 OR11H2Q8NH07 326 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 SDHCQ99643 169 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 OR2H2O95918 312 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 VSIG10L2P0DP72 767 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 AGAP20933 346 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 PUSL1Q8N0Z8 303 aaKnown RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 RBKSQ9H477 322 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 ABCA1O95477 2261 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 CGB1A6NKQ9 187 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 AHRRA9YTQ3 701 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 KCNAB3O43448 404 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 IL4P05112 153 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 SIGLEC14Q08ET2 396 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 TMEM30BQ3MIR4 351 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 FGFRL1Q8N441 504 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 ITLN1Q8WWA0 313 aa9.17□□□□□ -0.94
CLIP1-209ENST00000537178 QTRT1Q9BXR0 403 aaKnown RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 DUSP15Q9H1R2 295 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-209ENST00000537178 GVINP1Q7Z2Y8 2422 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 TRBV9A0A0B4J1U6 114 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 GPX1P07203 203 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 ADRA2AP08913 450 aa9.16□□□□□ -0.94
CLIP1-209ENST00000537178 PLAURQ03405 335 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms