RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BRWD1-AS2P59051 145 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 TMEM267Q0VDI3 215 aaPredicted RBP11.25□□□□□ -0.61
SMG6-203ENST00000536871 KLRB1Q12918 225 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 IZUMO4Q1ZYL8 232 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 PDLIM3Q53GG5 364 aaPredicted RBP11.25□□□□□ -0.61
SMG6-203ENST00000536871 BTNL3Q6UXE8 466 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 C22orf34Q6ZV56 151 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 THNSL2Q86YJ6 484 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 OR10P1Q8NGE3 313 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 DCTN5Q9BTE1 182 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 SAP30LQ9HAJ7 183 aa11.25□□□□□ -0.61
SMG6-203ENST00000536871 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 GVINP1Q7Z2Y8 2422 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 CYB5R3P00387 301 aaPredicted RBP11.24□□□□□ -0.61
SMG6-203ENST00000536871 SPCS3P61009 180 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 TLE1Q04724 770 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 RELQ04864 619 aaPredicted RBP11.24□□□□□ -0.61
SMG6-203ENST00000536871 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 EFNB3Q15768 340 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 SPRNQ5BIV9 151 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 NCMAPQ5T1S8 102 aa11.24□□□□□ -0.61
SMG6-203ENST00000536871 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
SMG6-203ENST00000536871 WDR61Q9GZS3 305 aaKnown RBP11.24□□□□□ -0.61
SMG6-203ENST00000536871 PPIAL4EA0A075B759 164 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 PPIAL4DF5H284 164 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 FCGR3BO75015 233 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 IFNA10P01566 189 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 PPIAL4FP0DN26 164 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 CA7P43166 264 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 GNB2P62879 340 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
SMG6-203ENST00000536871 OR2B11Q5JQS5 317 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 NCR3LG1Q68D85 454 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 SCRT1Q9BWW7 348 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 SH3BGRL2Q9UJC5 107 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 PPIAL4AQ9Y536 164 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
SMG6-203ENST00000536871 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 CEBPZOSA8MTT3 80 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 B9A039 149 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 C1QL1O75973 258 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 FAM87AP0C7U9 286 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
SMG6-203ENST00000536871 ID4P47928 161 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 FHITP49789 147 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 PPT1P50897 306 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 DEFA6Q01524 100 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 LTC4SQ16873 150 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 PRAMEF5Q5TYX0 476 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 ZNF429Q86V71 674 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 ST6GALNAC3Q8NDV1 305 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMG6-203ENST00000536871 CCL13Q99616 98 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
SMG6-203ENST00000536871 CHD3Q12873 2000 aaKnown RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 NDUFS6O75380 124 aaKnown RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 HRASP01112 189 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 GYPAP02724 150 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 HSPB1P04792 205 aaKnown RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 CD3EP07766 207 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 SELLP14151 372 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 DAOP14920 347 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 CHRNB4P30926 498 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 NPBWR1P48145 328 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 KHDC3LQ587J8 217 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 SP5Q6BEB4 398 aaPredicted RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 DDB2Q92466 427 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 WFIKKN1Q96NZ8 548 aa11.22□□□□□ -0.61
SMG6-203ENST00000536871 HEATR1Q9H583 2144 aaKnown RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 RPUSD1Q9UJJ7 312 aaKnown RBP11.22□□□□□ -0.61
SMG6-203ENST00000536871 C17orf112F2Z3M2 114 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 FSTL3O95633 263 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 CCL8P80075 99 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 MRPS11P82912 194 aaKnown RBP11.21□□□□□ -0.61
SMG6-203ENST00000536871 RUNX1Q01196 453 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 POU2AF1Q16633 256 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 VWC2Q2TAL6 325 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 RBMS3Q6XE24 437 aaKnown RBP11.21□□□□□ -0.61
SMG6-203ENST00000536871 C1QL4Q86Z23 238 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.61
SMG6-203ENST00000536871 OR4C12Q96R67 309 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.61
SMG6-203ENST00000536871 SLC25A10Q9UBX3 287 aaPredicted RBP11.21□□□□□ -0.61
SMG6-203ENST00000536871 TMPRSS2O15393 492 aa11.21□□□□□ -0.62
SMG6-203ENST00000536871 PROP1O75360 226 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms