RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PROP1O75360 226 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RHOGP84095 191 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 MED22Q15528 200 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RAB11BQ15907 218 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RNLSQ5VYX0 342 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SLC16A13Q7RTY0 426 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DEFB125Q8N687 156 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SRSF12Q8WXF0 261 aaKnown RBP9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 UFD1Q92890 307 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 KCTD12Q96CX2 325 aaKnown RBP9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GINS4Q9BRT9 223 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PECRQ9BY49 303 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SDHAF2Q9NX18 166 aa9.83□□□□□ -0.84
TNFRSF1A-207ENST00000535958 OR11H12B2RN74 326 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SLC17A2O00624 439 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CRYGBP07316 175 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 MAP2K4P45985 399 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 UBE2KP61086 200 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 QRFPP83859 136 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TMEM177Q53S58 311 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ADAD2Q8NCV1 583 aaKnown RBP9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ADTRPQ96IZ2 230 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SPIN2AQ99865 258 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SPIN2BQ9BPZ2 258 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 AKIP1Q9NQ31 210 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PLCXD1Q9NUJ7 323 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ALMS1Q8TCU4 4167 aa9.82□□□□□ -0.84
TNFRSF1A-207ENST00000535958 HYDINQ4G0P3 5121 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 IGKV1-6A0A0C4DH72 117 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DPPA5A6NC42 116 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 BMPR1BO00238 502 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DENRO43583 198 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ARL6IP5O75915 188 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CRYZL1O95825 349 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CD7P09564 240 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 UCHL1P09936 223 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PRSS8Q16651 343 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 IDO2Q6ZQW0 420 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SLC25A42Q86VD7 318 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 FAM89BQ8N5H3 189 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TEX45Q8NA69 505 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DCUN1D5Q9BTE7 237 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CENPOQ9BU64 300 aa9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 ZNF230Q9UIE0 474 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PRH1P02810 166 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GADD45AP24522 165 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SPHARQ15513 63 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 IGSF11Q5DX21 431 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 LIPKQ5VXJ0 399 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 LINC00322Q6ZN03 302 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 NECAP1Q8NC96 275 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TMEM203Q969S6 136 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CABLES2Q9BTV7 478 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 WFDC10AQ9H1F0 79 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 VCXQ9H320 206 aa9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 MRPS7Q9Y2R9 242 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 AK6Q9Y3D8 172 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-207ENST00000535958 A0A075B6Q4 140 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RBMY1BA6NDE4 496 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CXorf65A6NEN9 183 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RBMY1EA6NEQ0 496 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SRRM4A7MD48 611 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GGCTO75223 188 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 OR2J3O76001 311 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DIRAS3O95661 229 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 LY6G6CO95867 125 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CDK1P06493 297 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 FCGR3AP08637 254 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GNAO1P09471 354 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RBMY1DP0C7P1 496 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 HSMCR30P0CW71 290 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 FOLR2P14207 255 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TALDO1P37837 337 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TMEM50BP56557 158 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CLDN12P56749 244 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CDK10Q15131 360 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TRAM1Q15629 374 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DEFB114Q30KQ6 69 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 C15orf32Q32M92 178 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 MMD2Q8IY49 270 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 OR52B4Q8NGK2 314 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 FAM3DQ96BQ1 224 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 RAB3CQ96E17 227 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SCN3BQ9NY72 215 aa9.79□□□□□ -0.84
TNFRSF1A-207ENST00000535958 TRBV6-7A0A0A0MS04 114 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 C2orf70A6NJV1 201 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 FOXI3A8MTJ6 420 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PPP5D1E7EU14 171 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PTGES3LE9PB15 166 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 DHFRP00374 187 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GSTT2P0CG29 244 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 GSTT2BP0CG30 244 aa9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 SAA1P0DJI8 122 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 PSMA1P25786 263 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-207ENST00000535958 CALRP27797 417 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms