RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 OR4A8P0C604 315 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 GRNP28799 593 aaKnown RBP6.62□□□□□ -1.35
COL21A1-212ENST00000535941 SRPXP78539 464 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 GUK1Q16774 197 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 ZNF585BQ52M93 769 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 TBC1D26Q86UD7 250 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 SGPP2Q8IWX5 399 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 C8orf31Q8N9H6 132 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 OR13A1Q8NGR1 328 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 ELOVL1Q9BW60 279 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 CBLN4Q9NTU7 201 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 UBE2J1Q9Y385 318 aaPredicted RBP6.62□□□□□ -1.35
COL21A1-212ENST00000535941 VPS13CQ709C8 3753 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 HSBP1L1C9JCN9 74 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 TMEM178BH3BS89 294 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 MGST3O14880 152 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 ATXN7O15265 892 aaPredicted RBP6.62□□□□□ -1.35
COL21A1-212ENST00000535941 TRGC2P03986 189 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 RPLP1P05386 114 aaKnown RBP6.62□□□□□ -1.35
COL21A1-212ENST00000535941 CEACAM6P40199 344 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 SOHLH1Q5JUK2 328 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 MEX3BQ6ZN04 569 aaKnown RBP6.62□□□□□ -1.35
COL21A1-212ENST00000535941 ZNF645Q8N7E2 425 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 CCDC71LQ8N9Z2 235 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 OR10A7Q8NGE5 316 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 OR10V1Q8NGI7 309 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 RNF7Q9UBF6 113 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 FBXO7Q9Y3I1 522 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 RNF115Q9Y4L5 304 aa6.62□□□□□ -1.35
COL21A1-212ENST00000535941 YPEL1O60688 119 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 PROP1O75360 226 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 DFFBO76075 338 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 PRH1P02810 166 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 S100A10P60903 97 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 SP5Q6BEB4 398 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 MOGAT3Q86VF5 341 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 TGIF2LYQ8IUE0 185 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 DDB2Q92466 427 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 LSM10Q969L4 123 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 YPEL2Q96QA6 119 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 CNTNAP3Q9BZ76 1288 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 SLC5A7Q9GZV3 580 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 METTL8Q9H825 291 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 TMED3Q9Y3Q3 217 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 ZNF205O95201 554 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 TFF1P04155 84 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 IL6RP08887 468 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 F2RP25116 425 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 APOBEC3AP31941 199 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 RBMXP38159 391 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 RPL29P47914 159 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 SLC9A3R2Q15599 337 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 MIDNQ504T8 468 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 RPL7L1Q6DKI1 246 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 DTX2Q86UW9 622 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 TCTEX1D1Q8N7M0 179 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 HSD17B11Q8NBQ5 300 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 OR52M1Q8NGK5 317 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 ITLN2Q8WWU7 325 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 PARP11Q9NR21 331 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 CCL28Q9NRJ3 127 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 JPT1Q9UK76 154 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 ZNF727A8MUV8 499 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 HBZP02008 142 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 METTL15P1P0C7V9 234 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 TNFAIP6P98066 277 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 ARSJQ5FYB0 599 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 OR1L1Q8NH94 360 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 HIST1H2BLQ99880 126 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 PBDC1Q9BVG4 233 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 OR5AC2Q9NZP5 309 aa6.61□□□□□ -1.35
COL21A1-212ENST00000535941 RCL1Q9Y2P8 373 aaKnown RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 TET2Q6N021 2002 aaPredicted RBP6.61□□□□□ -1.35
COL21A1-212ENST00000535941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.6□□□□□ -1.35
COL21A1-212ENST00000535941 MSGN1A6NI15 193 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 B9A039 149 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 CCL21O00585 134 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 GOSR1O95249 250 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 MMP9P14780 707 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 GLIPR1P48060 266 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 ZNF343Q6P1L6 599 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 BTNL8Q6UX41 500 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
COL21A1-212ENST00000535941 SLC35G3Q8N808 338 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 GSKIPQ9P0R6 139 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 ODAMA1E959 279 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 NKX2-6A6NCS4 301 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 TRGC1P0CF51 173 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 HKR1P10072 659 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 CAMLGP49069 296 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 UBE2KP61086 200 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 ID3Q02535 119 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 AESQ08117 197 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
COL21A1-212ENST00000535941 DUX4L9Q6RFH8 374 aaPredicted RBP6.6□□□□□ -1.35
COL21A1-212ENST00000535941 WFDC8Q8IUA0 241 aa6.6□□□□□ -1.35
COL21A1-212ENST00000535941 LGI3Q8N145 548 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms