RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KCNK7Q9Y2U2 307 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 DMRT1Q9Y5R6 373 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 A3GALT2U3KPV4 340 aa8.5□□□□□ -1.05
CLSTN3-206ENST00000535668 LGALS9O00182 355 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 SNRPBP14678 240 aaKnown RBP8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 PJVKQ0ZLH3 352 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 PRSS8Q16651 343 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 RBM48Q5RL73 367 aaKnown RBP8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 ADAMTSL5Q6ZMM2 481 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 AHSA2Q719I0 299 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 CEACAM19Q7Z692 300 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 GTSCR1Q86UQ5 136 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 TTC9CQ8N5M4 171 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 DRAXINQ8NBI3 349 aaPredicted RBP8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 OSR1Q8TAX0 266 aaPredicted RBP8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 PECRQ9BY49 303 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 DUSP21Q9H596 190 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 CHMP1AQ9HD42 196 aaPredicted RBP8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 SLC35D1Q9NTN3 355 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 SDHAF2Q9NX18 166 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
CLSTN3-206ENST00000535668 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 PNMA8CA0A1B0GUJ8 204 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 ZNF785A8K8V0 405 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 FABP7O15540 132 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 RBMXL2O75526 392 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 ARL6IP5O75915 188 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 OR9G9P0C7N8 305 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 ATF4P18848 351 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 DUTP33316 252 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 LINC00205P59089 165 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 NECAP1Q8NC96 275 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 TSPAN14Q8NG11 270 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 OR5T1Q8NG75 326 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 GRPEL2Q8TAA5 225 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 ABHD5Q8WTS1 349 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 ARHGAP5-AS1Q96IT6 56 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 CNBD2Q96M20 576 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 TSC22D3Q99576 134 aa8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 CMSS1Q9BQ75 279 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 HDHD3Q9BSH5 251 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 TECRQ9NZ01 308 aaKnown RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 ZNF230Q9UIE0 474 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-206ENST00000535668 M0R1X1 148 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 RAB27BO00194 218 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 BMPR1BO00238 502 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 CREBL2O60519 120 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 JTBO76095 146 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 CNIH1O95406 144 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 FGF2P09038 288 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 KIR2DS2P43631 304 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 RTL8BQ17RB0 113 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 RPEL1Q2QD12 228 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 GPHB5Q86YW7 130 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 BVESQ8NE79 360 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 BPIFB6Q8NFQ5 453 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 FAM3DQ96BQ1 224 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 C5orf30Q96GV9 206 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 HARBI1Q96MB7 349 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 CLCC1Q96S66 551 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 SPIN2AQ99865 258 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 SPIN2BQ9BPZ2 258 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 RAB22AQ9UL26 194 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 CEPT1Q9Y6K0 416 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
CLSTN3-206ENST00000535668 TRAV1-2A0A0B4J238 106 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 MSGN1A6NI15 193 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 A8MWP6 167 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 MFNGO00587 321 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 SLC22A5O76082 557 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 FCGR3AP08637 254 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 RAB6AP20340 208 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 GABARAPL2P60520 117 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 ZNF45Q02386 682 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 ARL6IP1Q15041 203 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 C2orf76Q3KRA6 126 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 VMA21Q3ZAQ7 101 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 ZFAND6Q6FIF0 208 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 HAPLN4Q86UW8 402 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 H1FOOQ8IZA3 346 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 OR10J5Q8NHC4 309 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 SRSF12Q8WXF0 261 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 RSRP1Q9BUV0 290 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 TMED9Q9BVK6 235 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 KCNK15Q9H427 330 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 ACOT13Q9NPJ3 140 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 AKIP1Q9NQ31 210 aa8.46□□□□□ -1.06
CLSTN3-206ENST00000535668 A0A0B4J203 849 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 IZUMO1RA6ND01 250 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 SHOXO15266 292 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 CRYGCP07315 174 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 GALP22466 123 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 ALDH3B2P48448 385 aa8.45□□□□□ -1.06
CLSTN3-206ENST00000535668 MLLT11Q13015 90 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms