RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 HMSDA8MTL9 139 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 ARL14EPLP0DKL9 152 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 APCDD1LQ8NCL9 501 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 PILRAQ9UKJ1 303 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 MOSP00540 346 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 RELQ04864 619 aaPredicted RBP10.86□□□□□ -0.67
SPG11-203ENST00000535302 MTCL1Q9Y4B5 1905 aaKnown RBP10.86□□□□□ -0.67
SPG11-203ENST00000535302 GDF9O60383 454 aa10.86□□□□□ -0.67
SPG11-203ENST00000535302 TRAV8-6A0A0B4J262 113 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 ISG15P05161 165 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 FABP2P12104 132 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 FCARP24071 287 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 GFI1BQ5VTD9 330 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 C10orf35Q96D05 121 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 MRPL18Q9H0U6 180 aaKnown RBP10.85□□□□□ -0.67
SPG11-203ENST00000535302 OPN4Q9UHM6 478 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 A0A1W2PPC1 479 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 HOGA1Q86XE5 327 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 PILRBQ9UKJ0 227 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 POLR2AP24928 1970 aaKnown RBP10.85□□□□□ -0.67
SPG11-203ENST00000535302 GFRA3O60609 400 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 TMPRSS3P57727 454 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 OR52M1Q8NGK5 317 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 OR4D5Q8NGN0 318 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 M0R381 172 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 LHX2P50458 406 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 RND2P52198 227 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 PKIAP61925 76 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
SPG11-203ENST00000535302 IL19Q9UHD0 177 aa10.85□□□□□ -0.67
SPG11-203ENST00000535302 DNAL4O96015 105 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 PRR19A6NJB7 356 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 SRD5A1P18405 259 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 IRF3Q14653 427 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 RNASEH2CQ8TDP1 164 aaKnown RBP10.84□□□□□ -0.67
SPG11-203ENST00000535302 SAP25Q8TEE9 199 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 PIMREGQ9BSJ6 248 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 NDUFA3O95167 84 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 TYMSP04818 313 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 UBE2V2Q15819 145 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 SF3B6Q9Y3B4 125 aaKnown RBP10.84□□□□□ -0.67
SPG11-203ENST00000535302 MRGPRGQ86SM5 289 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 RAX2Q96IS3 184 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
SPG11-203ENST00000535302 SURF2Q15527 256 aaPredicted RBP10.84□□□□□ -0.67
SPG11-203ENST00000535302 ZNF658BQ4V348 819 aaPredicted RBP10.84□□□□□ -0.67
SPG11-203ENST00000535302 ABHD12Q8N2K0 398 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 PARD6GQ9BYG4 376 aaPredicted RBP10.84□□□□□ -0.67
SPG11-203ENST00000535302 A0A1W2PQM1 296 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 RAG2P55895 527 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 HS3ST3B1Q9Y662 390 aa10.84□□□□□ -0.67
SPG11-203ENST00000535302 ELOA3CA0A087WX78 387 aaPredicted RBP10.83□□□□□ -0.68
SPG11-203ENST00000535302 COX6A1P12074 109 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 MUC1P15941 1255 aaPredicted RBP10.83□□□□□ -0.68
SPG11-203ENST00000535302 CRYBB3P26998 211 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 FAM27BQ5VT28 67 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 KCNE5Q9UJ90 142 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 MYOFQ9NZM1 2061 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 DXOO77932 396 aaKnown RBP10.83□□□□□ -0.68
SPG11-203ENST00000535302 PNRC1Q12796 327 aaPredicted RBP10.83□□□□□ -0.68
SPG11-203ENST00000535302 Q5PR19 223 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 GOLT1AQ6ZVE7 132 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 DNASE2BQ8WZ79 361 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 CELA3AP09093 270 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 TSPAN7P41732 249 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 UNC119Q13432 240 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 CIRBPQ14011 172 aaKnown RBP10.83□□□□□ -0.68
SPG11-203ENST00000535302 TMEM136Q6ZRR5 245 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 TMEM238LA0A1B0GVL6 79 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 A6NJY4 79 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 RNASE4P34096 147 aaKnown RBP10.83□□□□□ -0.68
SPG11-203ENST00000535302 OR5AN1Q8NGI8 311 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 WNT9BO14905 357 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 NPVFQ9HCQ7 196 aa10.83□□□□□ -0.68
SPG11-203ENST00000535302 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 CHAC2Q8WUX2 184 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 WNT10AQ9GZT5 417 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 A0A0U1RRA0 63 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 CTXND1A0A1B0GTU2 59 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 HPRT1P00492 218 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 RAB24Q969Q5 203 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 FER1L5A0AVI2 2057 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 IGHV4-39P01824 125 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 LTBRP36941 435 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 NPBWR2P48146 333 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 CRYBA2P53672 197 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 NPC2P61916 151 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 SRIP30626 198 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 BEND2Q8NDZ0 799 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 LTBP4Q8N2S1 1624 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 PITX3O75364 302 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 TDGF1P13385 188 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 CXCL2P19875 107 aa10.82□□□□□ -0.68
SPG11-203ENST00000535302 LINC00596Q86U02 117 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms